| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2398 |
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| Symbol | |
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| ID | 3567582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2585030 |
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| End bp | 2586472 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637680865 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_285604 |
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| Protein GI | 71908017 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR03007] polysaccharide chain length determinant protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 0.0820285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATC GCTACGAAGC CTCAGCCCGT ATCTACGTGG ATACACAATC CATTCTTAAG
CCGTTGATGT CCGGACTGAC CGTTCAGCCG AACATAGAAC AACAAGTGAT GATGCTCAGT
CGAACGCTAA TCAGCCGACC CAATATCGAA AAATTGATTC GGATGGCTGA TCTTGACCTA
AAGATTCAGG GGAAACGCGA ACAAGAAGCA CTGATTGACG AGTTAATGAA GACTCTCGTG
ATTCAAAGTT TGGGCCGCGA CAACCTGTAC ACCATCGCCT ACCGCGACAC TGATCCTTCA
AAGGCGCAAC GGGTCGTACA GGCTCTGGTG TCGATTTTTG TTGAATCAAG CTTAGGGGAC
AAGCGGCAGG ACAGTGACTC CGCACTAAAA TTCATTGATG AACAAATAAG GAACTACGAA
AAGAAACTCG AAGATGCAGA AAGCCGCCTG AAGGATTTCA AGCTTCGCAA CGTTGAGCTG
AATACCGGCG AAGGCAGAAG CGGCATTGAT AAACTCTCCG AATTGACCAA TGTTTTGAAT
AGTTCAAGAC TTGCACTTCG CGAAGCCGAG AATTCACGTG ATGCACTGCG CAGGCAAATC
CTCGGTGAAG AGCCGGTGTT GTTGCCAGAA TCATCTAGCG GCGACTCAGG TGTTTCATTA
CCCGAGATTG ATGGCAGACT GGATGTACAG AAGCGCAACC TTGACAATTT ATTACAGCGC
TACACTGATC AACACCCCGA TGTCATTGGA ACACGTCGAC TGATCAAGGA TATTGAAGAG
CAGAAACGTC AGGAGCTCTT GGCTCGCAAA AAATTTGCAG CGGCCAATCC TGGAGCCTCC
GTCAGCAACA ACCCCGTGTA TCAACAACTA AAGGTGTCGT TAGCCGAGTC CGAAGCCAAT
GTAGCCTCGT TGCGCGCCCG TGTCAGCGAG TACGAAACTC GTTACAAGCG CACTACTGAC
TTGCTCAAGA CACAACCGCA ACTCGAAGCA GAATATACCC AACTTAATCG CGACTACGAC
ATTCACAAGA AAAACTACGA ACAGCTGGTT ACCCGCCGAG AAGCCGCCGA ACTGTCCGGC
GATCTTGAGT CAACAGGTTC TGGCGCTGAC TTTCGGCTAA TCGACCCGCC ACGGGCTTCG
TCAAAGCCTG TAGCCCCCAA CCGCCTCTTG CTCCTTCCTG GCGGACTTGC CTTGGCTTTG
GCTGCGGGCT TGTTTGTTGC ATTTGTCGCT AGCCAGATTC GCCCGGTATT CTTTGATGGC
AAGACCCTTC GCGAAGTATC AGGCTTGCCT CTTCTTGGCA CGGTTTCACT ACTGCCAAAC
CCCGTTCGAA AACAGAAGGA ACGAGCAAGT CTGAAGAGAT TTCTCATCGC CACGTTTGGC
CTAATTTCAG CGTATGGCTT TGGCATAGCC GCGCTTTTTA TACTCACCCA ACGCGCAGCC
TGA
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| Protein sequence | MPDRYEASAR IYVDTQSILK PLMSGLTVQP NIEQQVMMLS RTLISRPNIE KLIRMADLDL
KIQGKREQEA LIDELMKTLV IQSLGRDNLY TIAYRDTDPS KAQRVVQALV SIFVESSLGD
KRQDSDSALK FIDEQIRNYE KKLEDAESRL KDFKLRNVEL NTGEGRSGID KLSELTNVLN
SSRLALREAE NSRDALRRQI LGEEPVLLPE SSSGDSGVSL PEIDGRLDVQ KRNLDNLLQR
YTDQHPDVIG TRRLIKDIEE QKRQELLARK KFAAANPGAS VSNNPVYQQL KVSLAESEAN
VASLRARVSE YETRYKRTTD LLKTQPQLEA EYTQLNRDYD IHKKNYEQLV TRREAAELSG
DLESTGSGAD FRLIDPPRAS SKPVAPNRLL LLPGGLALAL AAGLFVAFVA SQIRPVFFDG
KTLREVSGLP LLGTVSLLPN PVRKQKERAS LKRFLIATFG LISAYGFGIA ALFILTQRAA
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