| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2188 |
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| Symbol | |
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| ID | 3566682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2362578 |
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| End bp | 2366390 |
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| Gene Length | 3813 bp |
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| Protein Length | 1270 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637680657 |
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| Product | hypothetical protein |
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| Protein accession | YP_285397 |
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| Protein GI | 71907810 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTCCC AAATCCGTTC GTTTCTGACT GACTCCCGAT TTCTTTCATT TGTCGGGGTG
GCCGCCGTGG CGGCATTCTT TTTCCTGGGG GCCAAGACGC TGAAGGTGGC GATGATTTGG
GCCGGGATCG CCAGTCTGGC CATACTCGCT GTCTGGGCTG TGGTCTGGTT CGTGCGCCGG
CAAAGGGCAC GCAAGGCGGG CGAGGCAATC GGCTCCATGC TTGAGCAGCA GGCCGATGTT
TTGCCAAAGC GTTCTGGTGC CGCGACCTCG GCTGAGATCC TGGCACTCAA GCAGCGCATG
CAGGAGGCGG TCAAGACAAT CAAGACCTCC AAGCTTGGCC AGGTCTCCGG GGCTGAGGCC
TTGTATGAAT TGCCGTGGTA CATGACGATA GGCAACCCGG CAGCCGGGAA AAGTACGGCC
ATCGTCAATT CAGGTCTGAA ATTCCCGTTT GACGACGGTG GCGACGCGAT CATCAAGGGC
ATTGGTGGCA CCCGCAACTG CGATTGGTTT TTCACGACCG ATGGCATCCT GCTTGATACG
GCGGGCCGTT ATTCAGTGCA TGAAGAAGAC CGCGAGGAGT GGCTCGGCTT CCTTGGCTTG
CTGAAGAAGC ATCGGCCGCG CGCGCCGATC AACGGCATCA TTGTCACCGT CAGCATTGGC
GAATTGATGG GTAATTCGCC CAGTTTCGCG ATCAACCTGG CCAAGAGCCT GCGCCAGCGG
GTCCAGGAAC TGACCGAGAA GCTGGAGGTA TTTGCCCCGG TCTATGTGCT ATTTACCAAG
GTCGACCTGA TTCCGGGGTT TCATGAATTC TTTCTCGATC TCGACTGGAA CGAGCGGGAC
CGGGTTTGGG GGGCGACCAT TCCATATGAC CAGTCGAACG GCAACGAATT GATCACGCTG
TTTGATCGTC ATTTTGACGA GTTGTATGAA GGTCTGCGTG CCATGAGCGT CGCTCAAATG
TCGCGGCTGC AGGGCGAAAA CGCACCGCCT GGACTGCTGA CTTTCCCATC CGAGTTTGCC
TCGATCAAAC CCGCCCTGAA GGCCTTTATC GCTACCCTGT TCGAGGATAA TCCCTTTCAG
TTCAAGCCGG TTTTCCGGGG CTTCTATATC ACCTCGGCCA TCCAGAGCAC CGATATCAAG
CCGGTCTCCA ACGACCGCAT CCTGAGAAAG TTTTCCTTGA ATGGCGGTGG CAGTGCTTCA
GTGCGTACCG CTTTGAGTCA TGGTTACTTC CTGAAGGAAC TGTTCTCGAA AGTGATTTTT
CCTGACCGAA ATCTGGTCCG CCAGCACACG ACCAAGGCAA AGGCTCAGTT ACGCCAGTTC
GCGGTGCTGG GGGCCTTGTG TTTCCTGGGC GTAGCACTGG GTGGGTGGAG CTGGTCGTAT
TTCAATAACC GTAGCCTGCT GGCCAATGTC GAGCAGGACA TCGCCAAGGC TGTGAAGGTG
CAGGAGGGGC GGATTGATCT GCAGTCTCGT CTTGAAGCGC TCGAAATCAT CCAGGATCGC
CTGGCCCAAC TTGAACAATT CAACGAGGAT CACCCACTTT CCATTGGCCT TGGGCTGTAT
CAAGGTGAGT TGATGGCTGA CAAACTACGT CGGGAATACT TTGCCGGCGT CAATAACGTC
ATGCTGATTC CGGTCAAGGA TAACCTCGAA GCTTTCCTGA ACGAGGTCAA TGCCCAGGGT
GACCGTCTCA AGCCACAAGG CGCTGCAGTA GCCAATCAGG CCGCCAAGCC GGCGCGTAGC
AAACAGTACA AGGATGCGAC GCCTTCCGAT GTCGAAGACG GCTACAACGC GCTCAAGACT
TACCTGATGC TGTCCAGCCA CGAGCATGTC GATGTCGGAC ATCTTTCTGA CCAGATGACG
CGTTTCTGGC GCGGCTGGCT GGAGGCTAAT CGCGGCACCA TGACGCGCGA GCAGATGATT
CGCTCGGCCG GGAAAGTGCT GACCTTCTAT CTGGAACACG CAACGCATCC TGAGTGGCCA
GTCATCGACA ACAATCTGGT TCTGGTCGAT GAAGTGCGCG ACAAGCTGCG CCAGGTCGTA
CGTGGCATGC CGGCGGCCGA ACGAGTCTAT GCCGAAATCA AGGCACGGGC ATCGACACGC
TTTGCTCCGC TGACCGTCGC CAACATCGTT GGTCCGGACA ATGCAGCGCT GGTTGCCGGT
AGCCACGTTG TGTCGGGGGC ATTCACGGTT GAGGCATGGC GCGAATACAT CCAGAACGCG
ATCAAGGAAG CGGCAACCAA TGAACAGAAC AACGCGGATT GGGTACTGCA AACCTCGACC
AAGGACGATC TGACCCTGGA GGGCAGCCCG GAGCAGATCC AGAAATCGCT GGTGGTCATG
TACAAGCGTG ATTACACGGA AGAGTGGAAG CAGTTTGTGC AGGGGGTCAG TGTCTCATCC
TTTGAAACGT TCCCCGAGGC TGTGGCGGCG ATGGATCGTT TGGGCGATGC GCAAATGTCA
CCGGTCGGCA CGCTGATCAA GGTGGTTTTT GACCAGACGG CCTGGGATAA CCCGGCGATG
GCCAATCTTG GTCTTGAGCG GGCCCAGAAG GGGTTTATCG AATGGTTCAA GCGATCGGTG
CTGCAGATGG CGCCGAGTCG TGTCCAGATG GATGTCAATG TGTCCGCCAA GCCGGCTGAA
ATCCCGATGG GGCCGATCGG CAAGGAGTTT GCCGGATTTG GCCGCTTGGT CATACCGCGC
GACAAGGCTG ATCCCTTGGT CGATACCTAC CTTAAGCAGC TATCCAAGGT TCGCACCCGC
CTGAATCAAC TCAAGAACCA GGGAGATCCT GGGCCGGGAG CGCTCAAGCT GATGCGGGAA
ACCATTGATG GCAACGGCTC CGAGTTGGCG GAAACACTCC GTTTCGTCGA TGAGCAGATG
CTGACCGGTC TGCCGGATAA TCAGCGTGCC GTCTTGCGTC CGTTGCTGGT TCGCCCTTTG
TTGCAGTCTT ATGCCGCGAT TATCAGGCCT GCCTCGGAAG AGCTAAACAA GACGTGGGAA
GCCCAGGTTT ACGAGCCGTT TAACCGCAAG CTCGCGATCA AGTATCCGTT TGCCGCAAAA
TCCAATATCG AGGCTTCGCC GACTGAAATT GCCCAGGTTT TCGGGCCAGA AGGCGCCGTC
TCCAAATACG TTGAATCTGC AATGGGGGCG TTGGTTGTCC GTCGGGGCAA TACCGTGACA
CCGCGGACCT GGGGGGATCT TGGCATTACC TTGCAGCCTG AGTTCATGAG CGACTTCGCG
CGCTGGGTCT CGCCGCTGGA GGGGGGCGCT GCAACCGATG CCGGCGGTGG GGCTGGCGGT
GCCGGTGGTC AGGCGCAGAC CGTCTTCATG TTGCGCCCGC AGCCATCGCC GGGAACCAGC
GGCTACGTGA TCGAGATTGA CGGGCAGAAG CTGGCTTATC GCAATGGCGC GCCGCAATGG
GCCAATTTTG TCTGGCCGAA TGCCGCTGGC GCACCGGGGG CAAAGATCAC CGCGACCACG
TTCGAGGGCA AAATTGTCGA GGTCATCAAC GTTCCAGGCC GCTTCGGGCT TGAAAAAATG
ATCAATGCCG CCAAGCGTAC CCGTCAGGCC GATGGTTCGT TCCATATGAC CTGGCTGGCA
GATGGTGTAG AGGTCGGTAT CGACCTCCGC GTGGTCAGCA GTGCGCAGGC GCAGGCAGCG
GGCAACGCGA ACGAAGGTGG CAGTGCCCAG CGTGGCCTGG CCGGGGTCGT ACTGCCCCGA
TCGGTGGCTG TCGGCAAAGC TGGCAAATAT CAGGAACCAG CGCAGGAGAC AGCCGCGCCG
GCCCCAGTCA ATACGGGAGG AGGTGTCCAA TGA
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| Protein sequence | MMSQIRSFLT DSRFLSFVGV AAVAAFFFLG AKTLKVAMIW AGIASLAILA VWAVVWFVRR
QRARKAGEAI GSMLEQQADV LPKRSGAATS AEILALKQRM QEAVKTIKTS KLGQVSGAEA
LYELPWYMTI GNPAAGKSTA IVNSGLKFPF DDGGDAIIKG IGGTRNCDWF FTTDGILLDT
AGRYSVHEED REEWLGFLGL LKKHRPRAPI NGIIVTVSIG ELMGNSPSFA INLAKSLRQR
VQELTEKLEV FAPVYVLFTK VDLIPGFHEF FLDLDWNERD RVWGATIPYD QSNGNELITL
FDRHFDELYE GLRAMSVAQM SRLQGENAPP GLLTFPSEFA SIKPALKAFI ATLFEDNPFQ
FKPVFRGFYI TSAIQSTDIK PVSNDRILRK FSLNGGGSAS VRTALSHGYF LKELFSKVIF
PDRNLVRQHT TKAKAQLRQF AVLGALCFLG VALGGWSWSY FNNRSLLANV EQDIAKAVKV
QEGRIDLQSR LEALEIIQDR LAQLEQFNED HPLSIGLGLY QGELMADKLR REYFAGVNNV
MLIPVKDNLE AFLNEVNAQG DRLKPQGAAV ANQAAKPARS KQYKDATPSD VEDGYNALKT
YLMLSSHEHV DVGHLSDQMT RFWRGWLEAN RGTMTREQMI RSAGKVLTFY LEHATHPEWP
VIDNNLVLVD EVRDKLRQVV RGMPAAERVY AEIKARASTR FAPLTVANIV GPDNAALVAG
SHVVSGAFTV EAWREYIQNA IKEAATNEQN NADWVLQTST KDDLTLEGSP EQIQKSLVVM
YKRDYTEEWK QFVQGVSVSS FETFPEAVAA MDRLGDAQMS PVGTLIKVVF DQTAWDNPAM
ANLGLERAQK GFIEWFKRSV LQMAPSRVQM DVNVSAKPAE IPMGPIGKEF AGFGRLVIPR
DKADPLVDTY LKQLSKVRTR LNQLKNQGDP GPGALKLMRE TIDGNGSELA ETLRFVDEQM
LTGLPDNQRA VLRPLLVRPL LQSYAAIIRP ASEELNKTWE AQVYEPFNRK LAIKYPFAAK
SNIEASPTEI AQVFGPEGAV SKYVESAMGA LVVRRGNTVT PRTWGDLGIT LQPEFMSDFA
RWVSPLEGGA ATDAGGGAGG AGGQAQTVFM LRPQPSPGTS GYVIEIDGQK LAYRNGAPQW
ANFVWPNAAG APGAKITATT FEGKIVEVIN VPGRFGLEKM INAAKRTRQA DGSFHMTWLA
DGVEVGIDLR VVSSAQAQAA GNANEGGSAQ RGLAGVVLPR SVAVGKAGKY QEPAQETAAP
APVNTGGGVQ
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