| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2124 |
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| Symbol | |
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| ID | 3567540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2295210 |
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| End bp | 2295890 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637680596 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_285336 |
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| Protein GI | 71907749 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 59 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00282888 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACAA GAAGCGCACT GGAGCCACGC CAGCACGATA CCGAGCTGGA ACTTGCACGA
CAGGTTGCGG CAGGCGATTC TGATGCCTTC CGGACCTTGA TGCGGCGGCA CAATCAAACG
CTCTACCGCA CCGCCCGCGC CGTCCTGCGC AACGATGCCG ACGCCGAAGA AATCGTCCAG
GAGGCCTGGC TGCTCGCCTA CCGCGCGCTG CACGGTTTTC GTGGCGAGGC CAAGCTCTCC
ACCTGGTTGA TCCGCATCGT CGTCAATCTC GCGCTGCGCC GTCGGCAAGG CCAGATGCGC
GACACAACGA TACGCGTCGA CTCTGCTGAA AACGAGGTCG AGGATATGCA CCCAAGTCCA
ACCGAAACCC CCGAATCAAA CGCGGCAAAC GGCGAATTGC GACGCCTGCT TGAATCACAT
ATCGACCGCC TGCCCGATAT GTACCGTGAA GTCTTCATCT TGCGCGGCGT CGAGGAACTG
GATGTCGAAG AAACCGCCAG CGCGCTCGGC CTGCCCGAGG CCACCGTCCG CACCCGCTTC
TTTCGCGCCC GGCACCAGTT ACGCGAGACC CTGGCGCAGG ACATCGATAT TGCTGTCGGT
GACGCATTTT CCTTCGCCGG CCATCGATGC GACCGCATCG TAGCCGGTGT CTTCAGGCGA
CTGGAAGAAG AGATTTCCTG A
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| Protein sequence | MKTRSALEPR QHDTELELAR QVAAGDSDAF RTLMRRHNQT LYRTARAVLR NDADAEEIVQ
EAWLLAYRAL HGFRGEAKLS TWLIRIVVNL ALRRRQGQMR DTTIRVDSAE NEVEDMHPSP
TETPESNAAN GELRRLLESH IDRLPDMYRE VFILRGVEEL DVEETASALG LPEATVRTRF
FRARHQLRET LAQDIDIAVG DAFSFAGHRC DRIVAGVFRR LEEEIS
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