Gene Daro_2111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2111 
Symbol 
ID3567007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2280035 
End bp2281252 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content51% 
IMG OID637680584 
ProductSodium/hydrogen exchanger 
Protein accessionYP_285324 
Protein GI71907737 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.0394035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.303188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAACT CGATTCAACT CTTTGGTCTG GTATTGCTGG GTGGATTGAC CGCCGGAGAA 
GTTTCGAGAA GATTTTTCGC CTTGCCGCGA ACGATCGGCT ATGTGCTGTT TGGATTGCTG
GTTGGTCAGA GTGGCCTAAA CTGGGTGACG CTTTTACACA TCGAATCTGC GCAGCTTTTC
ATCGATCTGG CGCTTGGCTT GATTTTGTTC GAGCTAGGCT ATCTGGTTCC GCGCAGTAAT
TTTGAGAACA GCCGCAATCG ATTGCTAACT GGTTTAGCCC TTTCCTTAAT GACGGGCTTC
CTAGTATTGG TTTTGTTTCG CTACTGGGGC TTTTCAGCAG GTTCTGCTTT GTTTGCGGCG
GCACTTTGCG TTGCCACTTC GCCTGCCATC ACCATTGCCA CTTGCAGTGA TGTCGGGGCC
AAAGGGGATC TTACCGGCTT GCTTTATACG ATGGTAGCGA TCAATGGTGC TGTTGCATTT
GCGGCGGTAG TGTTGCTCGT TCCTTTCCTT ATCGACAACG AGCCGATGAG TGGATTCGCA
CGCGTAAGCA GTGCACTGGG AAGCATTATC GGCTCGATAG TCCTGGGTGG GGCCTGTACC
GGATTGGTCC TAATGGGCGC TGAAAGACTC GAAAGGCAGG CTGAATACCA GCATCTTTTG
ATTCTCGGGA CCATCGTGCT CGGTGTCGGC ACTGCCGTTT ATCTGGATGT CTCGGTGTTT
CTGCCTATGC TGATCTTTGG CATTCTGGTG AGCACAATCG ACCGCGAACG GAAGGTGATT
GCCATTCGGA TTGCCAGTGA TGCCCGTGTA TTTCTTGTCA TCACCTTCGT ACTTGCCGGA
GCGGCACTTG ATATCGCCTA TCTGCGCGAC TATTGGCTGG AAGCCACATT GATTGCAGTC
GTGCGATTGA TTGGGCAAAT GGTGTCTATA TTTATTTCGC GCAAATTTAT TGGCCTGAAT
ATGCGTGAGT GTTATTTCCT GAGTATCGGA CTACAACCGA TGTCGAGCAT CGCGCTGGTA
CTTCTGGTTA ACACCCAGAT GCTCTATAGC GGCATGGATG CCAAGCTGGT TGGCATGCTG
ATGGCAACGA TCCTGCTGAT GCAATTATTT GGTCCGCTGG CGACTCAAAC GGCGATCAAG
GGATTCGGCG AGGCAACTCG ACTTCGCCCC ACAACCAAAA ACGAAATACC CGCAGAGAAC
CATGGAGGCA CATCATGA
 
Protein sequence
MFNSIQLFGL VLLGGLTAGE VSRRFFALPR TIGYVLFGLL VGQSGLNWVT LLHIESAQLF 
IDLALGLILF ELGYLVPRSN FENSRNRLLT GLALSLMTGF LVLVLFRYWG FSAGSALFAA
ALCVATSPAI TIATCSDVGA KGDLTGLLYT MVAINGAVAF AAVVLLVPFL IDNEPMSGFA
RVSSALGSII GSIVLGGACT GLVLMGAERL ERQAEYQHLL ILGTIVLGVG TAVYLDVSVF
LPMLIFGILV STIDRERKVI AIRIASDARV FLVITFVLAG AALDIAYLRD YWLEATLIAV
VRLIGQMVSI FISRKFIGLN MRECYFLSIG LQPMSSIALV LLVNTQMLYS GMDAKLVGML
MATILLMQLF GPLATQTAIK GFGEATRLRP TTKNEIPAEN HGGTS