Gene Daro_2062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2062 
Symbol 
ID3570184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2218993 
End bp2220093 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content61% 
IMG OID637680536 
Producttransaldolase 
Protein accessionYP_285276 
Protein GI71907689 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00876] transaldolase, mycobacterial type 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAT CCAAAAGCAC CAACCCGCTG CTGGCGATCA AGGCGCTTGG CCAGCACCTC 
TGGCTCGACA ACCTGTCGCG CACCTTGTTG CGCGAAGGCG GCCTGCAACG CCTGATCAAC
GAGGACGGCA TTGATGGCGT GACCTCGAAT CCGGCCATTT TCGAGAAGGC CATCGCCGGC
AGCCCGTATT ACCGTGAAGA TCTGGAACGC TTGCGTGGTG CCGGCCTGGA TGCCGAGGCC
TGTTACGAAT CGCTGGTCAT CGCCGACATT CGGGCGGCCT GCGCCATGTT GCTGCCGGCC
TTCCGGGCCA GTCGTGGCGA GAGCGGTTAC GTCAGCCTGG AAGTTTCGCC GGCGCTGGCC
AACGATACGG CGGGCACCGT TGCCGCAGCC CATCGCCTGT TCGATACGGT CGGGCGCGAC
AATCTGCTGA TCAAGGTGCC AGGAACACCG GCGGGAATTG ACGCTTTTGA AGCCTTGAGC
GCGGCCGGAC TGTCGGTCAA CGTCACCCTG ATTTTTTCGC TGGCGCAATA CGAGGCAGTC
GCTCAGGCTT ATTTGCGCGG TGCTTTGCGC TGGGTGGAGA GCGGGGGAAA AGCCCGGCAT
CTGCGTTCGG TCGCCAGCAT CTTCCTCAGT CGTGTCGATA CGGTGGTTGA TAAACGCCTC
GATTTACTGG GCACCGCGCA TGCCGAGCGA CTCAGCGGGC GCGCCGGCGT CGCGCTGGCC
AAATGTTGCC ATGGCCGATA CCGCGACATT TTCCACGGGC CTGATTTTGC CTTGCTGCGT
CTGGCCGGCC TCCGGCCGCA GACACCGCTC TGGGCCAGCA CCGGCAGCAA GAATCTGGCG
TACAGCGATG TGCTCTATGT CGAACCGCTG ATCGGCGCAG AAAGTATCAA TACGCTGCCC
GATCCGACGC TGGCGGCTTT TCGCCAGCAT GGGCAGGTGG CCAATCGCCT GCAGGAAGGC
CTGGAGGAAG CTCAGGCACA TATTCAGGCC CTGCTGGACC TGGGTATCGA TCTGAACGCA
GTGGGCGAAA GCCTGCAAAG CGATGGTGTA AAACTGTTTG CCGAGGCCTA TCAGAAGATC
TTGCTTGGCT TGCAGGCGTG A
 
Protein sequence
MNKSKSTNPL LAIKALGQHL WLDNLSRTLL REGGLQRLIN EDGIDGVTSN PAIFEKAIAG 
SPYYREDLER LRGAGLDAEA CYESLVIADI RAACAMLLPA FRASRGESGY VSLEVSPALA
NDTAGTVAAA HRLFDTVGRD NLLIKVPGTP AGIDAFEALS AAGLSVNVTL IFSLAQYEAV
AQAYLRGALR WVESGGKARH LRSVASIFLS RVDTVVDKRL DLLGTAHAER LSGRAGVALA
KCCHGRYRDI FHGPDFALLR LAGLRPQTPL WASTGSKNLA YSDVLYVEPL IGAESINTLP
DPTLAAFRQH GQVANRLQEG LEEAQAHIQA LLDLGIDLNA VGESLQSDGV KLFAEAYQKI
LLGLQA