Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1998 |
Symbol | |
ID | 3567713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 2150308 |
End bp | 2152149 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637680469 |
Product | GTP-binding protein TypA |
Protein accession | YP_285214 |
Protein GI | 71907627 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 0.472185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCTC GTCCGATCCG TAACATCGCC ATCATCGCCC ACGTTGACCA CGGTAAAACC ACCCTGGTCG ACCAGCTGCT CCGCCAGTCC GGTACTTTTG CTGCTCACCA ACAATTGGTT GAGTGCGTTA TGGACTCCAA TGACCTGGAA AAAGAGCGTG GCATCACGAT CCTTTCCAAG AACACTGCGG TCGAGTATCA GGGCGTCCAC ATCAACATCG TTGATACCCC GGGACACGCG GACTTCGGTG GTGAAGTCGA GCGCGTGCTG GGTATGGTTG ATGGTGTGGT CCTGCTGGTC GATGCTGCCG AAGGCCCGAT GCCGCAAACC CGTTTCGTGA CCAAGAAGGC GCTGGCCCTC GGCCTGCGCC CGATCGTTCT GGTCAACAAG GTTGACCGCG ATGGCGCCGA TCCCGATCAG GCCGTCAATC TGACCTTCGA CCTGTTCGAC AAGCTGGGCG CGACCGACGA GCAACTCGAT TTCCCGATCG TTTACGCATC CGGCCTCAAT GGCTGGGCTG CCATGGAGCT GGATCAGCCG CGCGAAAACA TGATTCCGCT GTTCGACACG ATTCTGCGCC ACGTGCCCGC CCCGGATACC GATATCGAAG CACCGCTGCA ACTGCAGATT ACTGCGCTTG ATTACTCTTC CTACGTCGGT CGTATCGGCG TTGGCAAGAT CAATCGCGGC AAGGTCAAGA CCGGTCAGAA CGTGCTGGTC ATGTTCGGTA CCGAAGAAGA AGCGGCCGAA CACGAGCGCA CCCCGATCAA GGCCAAGATT GGCCAGGTTT TCGGCTACAA GGGCCTGAAC AAGGTTGAGC TGGAAGAAGG TCATGCTGGC GACATCGTCC AGATTACCGG CATCGAAGAC CTGGTGCTCG GCTGCACCGT AACCGATCCG GAGCAACCGG AATCCCTGCC GCTGCTGAAG ATCGACGAGC CGACGTTGTC CATGCAGTTC ATGGTCAACA CCAGCCCGCT GGCTGGTACC GAAGGCAAGT TCGTGACTAG CCGTCAGATC CGCGATCGTC TGCACAAGGA ACTGCTGACC AATATGGCCC TGCGCGTTCA TGACACCGGT AATGGCGACG TGTTCGACGT TTCAGGTCGT GGCGAACTGC ACCTCGGCAT CCTGCTCGAG AACATGCGTC GCGAAGGCTA CGAGCTGGCC GTCGGCCGTC CGCGCGTCGT CAAGAAGACC ATCAATGGTG TCGAGTGCGA GCCGTATGAG TTGCTGACCG TTGACGTCGA AGAAGACACC CAGGGCGGTG TCATGGAAAG CCTTGGCCAG CGCAAGGGCG ACCTGACGGA CATGGTGCCA GACGGCCGCG GTCGCGTCCG TATCGAATAC CGCATTCCGG CCCGTGGTCT GATCGGCTTC CAGGGCGAGT TCATGAACTT GACCCGTGGT AACGGCCTGA TGAGCCACGT TTTCGACGAA TATGCCCCGG TCAAGGATGG CAGCGTTGCC GAGCGTCGCA ACGGCGTACT GATCTCCCAG GACAATGGCG AAGCTGTTGC CTATGCACTG TGGAAGCTGC AGGATCGCGG CCGCATGTTC GTTGTGCCGG GCGACAAGCT GTACGAAGGC ATGATCATCG GTATCCACAG CCGTGAAAAC GACCTCGTGG TTAACCCGAT CAAGGGCAAG CAGCTGACCA ACGTTCGCGC CTCCGGTACG GACGAAGCTG TTCGCCTGGT GCCGGCCGTC CAGCTTAGCC TGGAAGCCGC TGTCGAGTTT ATCGAGGAAG ACGAACTGGT CGAGCTGACG CCGAAGTCGA TTCGTTTGCG CAAGCGTTAT CTGACCGAGA TTGAGCGCAA GCGCGCGGTT CGCGGCCTGT AA
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Protein sequence | MSARPIRNIA IIAHVDHGKT TLVDQLLRQS GTFAAHQQLV ECVMDSNDLE KERGITILSK NTAVEYQGVH INIVDTPGHA DFGGEVERVL GMVDGVVLLV DAAEGPMPQT RFVTKKALAL GLRPIVLVNK VDRDGADPDQ AVNLTFDLFD KLGATDEQLD FPIVYASGLN GWAAMELDQP RENMIPLFDT ILRHVPAPDT DIEAPLQLQI TALDYSSYVG RIGVGKINRG KVKTGQNVLV MFGTEEEAAE HERTPIKAKI GQVFGYKGLN KVELEEGHAG DIVQITGIED LVLGCTVTDP EQPESLPLLK IDEPTLSMQF MVNTSPLAGT EGKFVTSRQI RDRLHKELLT NMALRVHDTG NGDVFDVSGR GELHLGILLE NMRREGYELA VGRPRVVKKT INGVECEPYE LLTVDVEEDT QGGVMESLGQ RKGDLTDMVP DGRGRVRIEY RIPARGLIGF QGEFMNLTRG NGLMSHVFDE YAPVKDGSVA ERRNGVLISQ DNGEAVAYAL WKLQDRGRMF VVPGDKLYEG MIIGIHSREN DLVVNPIKGK QLTNVRASGT DEAVRLVPAV QLSLEAAVEF IEEDELVELT PKSIRLRKRY LTEIERKRAV RGL
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