Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1993 |
Symbol | |
ID | 3567708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 2143768 |
End bp | 2145894 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637680464 |
Product | stage II sporulation E family protein |
Protein accession | YP_285209 |
Protein GI | 71907622 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCGAC CAAGCGGACT GCTCCTTGCA GCGATCCGGG CCGGACGCGG CCGGGCGCTC CCGCTGCTGT TGCTGCTCCT CGCAGCCTTG GTGCTGAATG GAATCGAGAA CACACCACTG CTCAGTGTTC GCGAGGCGCA ATTCGACCAC TACCAGCGAC TGATGCCGCG TGCTCGCGAC AGCGAGCCAG TCATCATCGT CGGAATTGAT AGCCAGAGCC TGGTCAAGCA CGGGCAATGG CCGTGGTCGC GAGATCTGGT CGCCCGATTG GCGGACAAGA TACTCGCTGG CAAACCTCTG GCCCTGGGCA TCGATATTGT TTTTGCCGAG CGTGATCGCT ACAGCCCGGA AATCCTTGCC AATCAGTTCC CCGGCTTGCC GGCCGATGCA TTTGCAAAAC TACCCGAGCC CGACCAGCAA CTGGCCCTGG CCCTGGCTGG ACAGCCGACC GTATTGGCTG TTGTCGGCTT GAGCAAGTTG CTGCCCGGTT CAAAACAACC GACCAGGCCG CTCCCGGTTT TCAGCCAGGA GCCCAGTCAC GACCAATACC TGCCGCATTA CGCCAGCGCC TTTGCCAGCC GCCCTCTTCT TGAAAGTGCC GCAGCTGGCG AGGGTTTGAT CAACGCCAGC CCAGGCTTGC TGCAGTCGAA CAGTGAGCGC GGCATACTGC GCCGAGTGCC AACCCTGTCA TTGATCAACG ACCTGCCCTT CCTGTCATTG CCACTGGAAA TGGTTCGCCT GGCGCTTGGC CCTGGTGGCA AGGTGGCAAT GGAAGGTGGA AGTCATGGCC TGACCGCAGT CCGGATTGGT AGCTACCGCC TGCCGACCCG CCCGAATGGC GAACTACTGA TGCATTTCGG CCGCGCCAAC TCCAATTACT ATCTTTCTGC CGCTGACGTG CTGGCGGGCG TACATCCTCC GGAGCTCTTC AACAACCACT TCGTCATCAT CGGCTTTAAC AGCACAGGTC TGCAGGACCG CATCATCACC CCACTCGGCG AAAGCCTGCC GGGGATCGAT ATTCACGCTC AGGTCATCGA AAGCCTGTTG GATGGACAGG CATTACAACG CCCCTACTGG ATAGCGCAGA TCGAACTGGC TTCACTGTTG TGTGGCGGTT TGCTGCTGAT CGGCACTATC CCGTTGCTCA GGGCGCGACG CTACGCGGCC CTGAGTTTTA CCGTTCTAAT GCTGTTTCTC CTGGCCGGCG GCTACCTCGC TTTTTTTGCC GGACGTTGGC TTTTCGACGG TGCTTCGCAA ATTATCCTGC TCAGCCCGGT TTTCATAGCG TTGCTTGGCA ACACACTGAT CACCGCTGAC ACCCAGCGTC GCGAGGCGGA ACGGCAGTTG CAGAAAAGCC GTGAAGAGGC GGCATGGGTT AATGGTGAAC TCGATGCGGC AAGGCGAATC CAGATGGGGT TGTTACCGGA CACCACCGCG ATGTTTGCCG AGGAAACCCG ATTTGAGGTG GCCGCCTTGC TCGAACCGGC TCGAGCGGTA GGTGGTGACT ACTACGATTG CTTCATGCTC GACGACCGTC GGCTCTGCCT GGCCATCGGC GACGTCTCCG GCAAGGGCGT GCCAGCCAGC CTGTTCATGG CAATCTCGAA GACCCTGACC GGTACGCTGG CCCGCCGCCA ACATGACCTC GGACTGGCGC TCCGAGAAAT CGAAAGCGAA CTGAACCGGG AGAATCCGGA ATGCCTGTTC GTCACCGCCT TCATCAGCAT CCTGGATATC GAAACCGGCA CCATGGAATA TGCCTGCGCC GGCCACGATG CTCCCATCGT GCTGCGAGAC GGTGGTCTGT CGCGCATCGA TACGGCAAAC ATTTCCGGAC CACCACTATG CACTGCCGAT GACTACCCGT TCCTTGCTGC AAAAGTGCAA CTGCTACCAG GCGATCTGCT TTGTCTGTTT ACTGACGGCG TCACCGAAGC CATGAACGAC AAGGAAATGT TCGGCAGCGA CCGACTGTTG GCGAACATCG GCGAGCTCCA GGCCGCTGAT CTTCCGGCAG CCATCAAGAC ACTGCGCGAT GCTGTTCGGT ATTTCGAAGC AGGTCACCCA TCATCGGATG ACCTGACCCT GCTCTTGATG CGCTGGAACG GGCCTAGCGT ACGTTGA
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Protein sequence | MTRPSGLLLA AIRAGRGRAL PLLLLLLAAL VLNGIENTPL LSVREAQFDH YQRLMPRARD SEPVIIVGID SQSLVKHGQW PWSRDLVARL ADKILAGKPL ALGIDIVFAE RDRYSPEILA NQFPGLPADA FAKLPEPDQQ LALALAGQPT VLAVVGLSKL LPGSKQPTRP LPVFSQEPSH DQYLPHYASA FASRPLLESA AAGEGLINAS PGLLQSNSER GILRRVPTLS LINDLPFLSL PLEMVRLALG PGGKVAMEGG SHGLTAVRIG SYRLPTRPNG ELLMHFGRAN SNYYLSAADV LAGVHPPELF NNHFVIIGFN STGLQDRIIT PLGESLPGID IHAQVIESLL DGQALQRPYW IAQIELASLL CGGLLLIGTI PLLRARRYAA LSFTVLMLFL LAGGYLAFFA GRWLFDGASQ IILLSPVFIA LLGNTLITAD TQRREAERQL QKSREEAAWV NGELDAARRI QMGLLPDTTA MFAEETRFEV AALLEPARAV GGDYYDCFML DDRRLCLAIG DVSGKGVPAS LFMAISKTLT GTLARRQHDL GLALREIESE LNRENPECLF VTAFISILDI ETGTMEYACA GHDAPIVLRD GGLSRIDTAN ISGPPLCTAD DYPFLAAKVQ LLPGDLLCLF TDGVTEAMND KEMFGSDRLL ANIGELQAAD LPAAIKTLRD AVRYFEAGHP SSDDLTLLLM RWNGPSVR
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