Gene Daro_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1993 
Symbol 
ID3567708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2143768 
End bp2145894 
Gene Length2127 bp 
Protein Length708 aa 
Translation table11 
GC content59% 
IMG OID637680464 
Productstage II sporulation E family protein 
Protein accessionYP_285209 
Protein GI71907622 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCGAC CAAGCGGACT GCTCCTTGCA GCGATCCGGG CCGGACGCGG CCGGGCGCTC 
CCGCTGCTGT TGCTGCTCCT CGCAGCCTTG GTGCTGAATG GAATCGAGAA CACACCACTG
CTCAGTGTTC GCGAGGCGCA ATTCGACCAC TACCAGCGAC TGATGCCGCG TGCTCGCGAC
AGCGAGCCAG TCATCATCGT CGGAATTGAT AGCCAGAGCC TGGTCAAGCA CGGGCAATGG
CCGTGGTCGC GAGATCTGGT CGCCCGATTG GCGGACAAGA TACTCGCTGG CAAACCTCTG
GCCCTGGGCA TCGATATTGT TTTTGCCGAG CGTGATCGCT ACAGCCCGGA AATCCTTGCC
AATCAGTTCC CCGGCTTGCC GGCCGATGCA TTTGCAAAAC TACCCGAGCC CGACCAGCAA
CTGGCCCTGG CCCTGGCTGG ACAGCCGACC GTATTGGCTG TTGTCGGCTT GAGCAAGTTG
CTGCCCGGTT CAAAACAACC GACCAGGCCG CTCCCGGTTT TCAGCCAGGA GCCCAGTCAC
GACCAATACC TGCCGCATTA CGCCAGCGCC TTTGCCAGCC GCCCTCTTCT TGAAAGTGCC
GCAGCTGGCG AGGGTTTGAT CAACGCCAGC CCAGGCTTGC TGCAGTCGAA CAGTGAGCGC
GGCATACTGC GCCGAGTGCC AACCCTGTCA TTGATCAACG ACCTGCCCTT CCTGTCATTG
CCACTGGAAA TGGTTCGCCT GGCGCTTGGC CCTGGTGGCA AGGTGGCAAT GGAAGGTGGA
AGTCATGGCC TGACCGCAGT CCGGATTGGT AGCTACCGCC TGCCGACCCG CCCGAATGGC
GAACTACTGA TGCATTTCGG CCGCGCCAAC TCCAATTACT ATCTTTCTGC CGCTGACGTG
CTGGCGGGCG TACATCCTCC GGAGCTCTTC AACAACCACT TCGTCATCAT CGGCTTTAAC
AGCACAGGTC TGCAGGACCG CATCATCACC CCACTCGGCG AAAGCCTGCC GGGGATCGAT
ATTCACGCTC AGGTCATCGA AAGCCTGTTG GATGGACAGG CATTACAACG CCCCTACTGG
ATAGCGCAGA TCGAACTGGC TTCACTGTTG TGTGGCGGTT TGCTGCTGAT CGGCACTATC
CCGTTGCTCA GGGCGCGACG CTACGCGGCC CTGAGTTTTA CCGTTCTAAT GCTGTTTCTC
CTGGCCGGCG GCTACCTCGC TTTTTTTGCC GGACGTTGGC TTTTCGACGG TGCTTCGCAA
ATTATCCTGC TCAGCCCGGT TTTCATAGCG TTGCTTGGCA ACACACTGAT CACCGCTGAC
ACCCAGCGTC GCGAGGCGGA ACGGCAGTTG CAGAAAAGCC GTGAAGAGGC GGCATGGGTT
AATGGTGAAC TCGATGCGGC AAGGCGAATC CAGATGGGGT TGTTACCGGA CACCACCGCG
ATGTTTGCCG AGGAAACCCG ATTTGAGGTG GCCGCCTTGC TCGAACCGGC TCGAGCGGTA
GGTGGTGACT ACTACGATTG CTTCATGCTC GACGACCGTC GGCTCTGCCT GGCCATCGGC
GACGTCTCCG GCAAGGGCGT GCCAGCCAGC CTGTTCATGG CAATCTCGAA GACCCTGACC
GGTACGCTGG CCCGCCGCCA ACATGACCTC GGACTGGCGC TCCGAGAAAT CGAAAGCGAA
CTGAACCGGG AGAATCCGGA ATGCCTGTTC GTCACCGCCT TCATCAGCAT CCTGGATATC
GAAACCGGCA CCATGGAATA TGCCTGCGCC GGCCACGATG CTCCCATCGT GCTGCGAGAC
GGTGGTCTGT CGCGCATCGA TACGGCAAAC ATTTCCGGAC CACCACTATG CACTGCCGAT
GACTACCCGT TCCTTGCTGC AAAAGTGCAA CTGCTACCAG GCGATCTGCT TTGTCTGTTT
ACTGACGGCG TCACCGAAGC CATGAACGAC AAGGAAATGT TCGGCAGCGA CCGACTGTTG
GCGAACATCG GCGAGCTCCA GGCCGCTGAT CTTCCGGCAG CCATCAAGAC ACTGCGCGAT
GCTGTTCGGT ATTTCGAAGC AGGTCACCCA TCATCGGATG ACCTGACCCT GCTCTTGATG
CGCTGGAACG GGCCTAGCGT ACGTTGA
 
Protein sequence
MTRPSGLLLA AIRAGRGRAL PLLLLLLAAL VLNGIENTPL LSVREAQFDH YQRLMPRARD 
SEPVIIVGID SQSLVKHGQW PWSRDLVARL ADKILAGKPL ALGIDIVFAE RDRYSPEILA
NQFPGLPADA FAKLPEPDQQ LALALAGQPT VLAVVGLSKL LPGSKQPTRP LPVFSQEPSH
DQYLPHYASA FASRPLLESA AAGEGLINAS PGLLQSNSER GILRRVPTLS LINDLPFLSL
PLEMVRLALG PGGKVAMEGG SHGLTAVRIG SYRLPTRPNG ELLMHFGRAN SNYYLSAADV
LAGVHPPELF NNHFVIIGFN STGLQDRIIT PLGESLPGID IHAQVIESLL DGQALQRPYW
IAQIELASLL CGGLLLIGTI PLLRARRYAA LSFTVLMLFL LAGGYLAFFA GRWLFDGASQ
IILLSPVFIA LLGNTLITAD TQRREAERQL QKSREEAAWV NGELDAARRI QMGLLPDTTA
MFAEETRFEV AALLEPARAV GGDYYDCFML DDRRLCLAIG DVSGKGVPAS LFMAISKTLT
GTLARRQHDL GLALREIESE LNRENPECLF VTAFISILDI ETGTMEYACA GHDAPIVLRD
GGLSRIDTAN ISGPPLCTAD DYPFLAAKVQ LLPGDLLCLF TDGVTEAMND KEMFGSDRLL
ANIGELQAAD LPAAIKTLRD AVRYFEAGHP SSDDLTLLLM RWNGPSVR