Gene Daro_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1874 
Symbol 
ID3569570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2014292 
End bp2014834 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content58% 
IMG OID637680345 
Productcyclase/dehydrase 
Protein accessionYP_285090 
Protein GI71907503 
COG category[S] Function unknown 
COG ID[COG3427] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTCAA AAATCCTTGG TTTCCTGCTG TTGGCACTAA GCTGGCTGCC ACTGACTGCC 
TTCGGCATCA CTGACGACGA TGTCCATGTC GAATACCGGA ACGGCACCTA TTACGCCAAC
CTGACCATCC AGATCGCGGT ACCGCCGAGC TCCGCTTTCG CTGTGCTGAT CGATTTTGAA
CGCATGCCGA ACTTCATGCC CGGCCTGGCC AGTAGCCGTA TCACATCGCG TCAGAACAAT
GTCTATTTGG TCGCCCAGCG CGGCAAAGTA ACATTTGGCC CATTCTCGAT GCCCTACGAA
AGCGAACGGC GGATAGAGAC CATCGACAAT TCGAAGATTC TCTCCCGTTC GGTGGCCGGC
TCGGCCCGCC GGATGCAAAG CGAAATGCGC CTGCAGTCGT CGGAGCCAGG CACTCGCCTC
GATTACAAAA TCGAAATCGA GCCCGATAGC TGGCTGCCGA GTTCCCTGGG CATCAACTTC
CTGCAGCACG AACTGGCCGA GCAGTTCAAC GCCCTGGGCC GCGAGATGGT GCGCCGGCAA
TGA
 
Protein sequence
MGSKILGFLL LALSWLPLTA FGITDDDVHV EYRNGTYYAN LTIQIAVPPS SAFAVLIDFE 
RMPNFMPGLA SSRITSRQNN VYLVAQRGKV TFGPFSMPYE SERRIETIDN SKILSRSVAG
SARRMQSEMR LQSSEPGTRL DYKIEIEPDS WLPSSLGINF LQHELAEQFN ALGREMVRRQ