| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1834 |
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| Symbol | |
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| ID | 3566088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1972199 |
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| End bp | 1974562 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637680305 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_285050 |
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| Protein GI | 71907463 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0450384 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGAC CGCTTCACCT CGCGCTGCTC GTATCGGCTA TCTGGGCCGG CAGCGCTTTC
GCCCAGAGCA AATCATTCGA CCTGCCGGCA CAAGGGCTGG GCAGTGCCCT GACCGCGCTG
GCCAAACAGG GCGGCATCCA GATTCTCTTC GATGCCGATG CGCTCAAGGG CAAGCAGGCC
TCGATGCTAC GCGGCAGCTA TTCAGCTGAC GAAGCACTCG GCAAGCTGCT ATCGGGGAGC
GGTTTTCAGG CCGTGTCGAC CGGCAAGGCA ACCTACGCCA TCCAGAAGCG GCCGCCAGCA
GAAGGGGCAC CCAATGTGCT GGGCGAGGTT ACGGTAACCG CGACGCCGGA ACGCAGCTAC
AAGGCGGACA AGGTCAGCGT GGCCGGGAAG ATGCCGCTCA CACTGCGCGA GATTCCCAAC
TCCGTTTCCG TTCTGACCCG GGAGCAGATG GACGATCAGA ACATGGTTAC CGTCTGGGAT
GCGATGTCGC AGATGCCCGG GGTTCAGGCC ATCGCCAACG ATATTTCGCA GGGGCAGTAC
CACTCGCGAG GGGCGGCGCT CGACGTTCAA TTCGACGGCG CGCCCTCGAC CTTGCCCTTG
TCGGGCTACC AGCAGTTTGA CTTGGCCATG TATGAACGCA TCGAGGTGTT GCGCGGTCCT
TCGGGTTTCG TCCAGGGCTC GGGGGCAATT TCCGGAACGG TCAATTTCGT CCGCAAGCGC
GCTGAGAAAG AATTCGCCAG CCGTTTTCTG GCCTCGACGG GGTCATGGAA CAACAATCGC
CTGGAGGCGG ATGTGACCGG CGGCCTGGCG CAGGATGGCC GCCTGCGCGG CCGGGCCGTT
TTCTCCTACG TCGATCGCGA CTATGTCTTC AATCGTGTTC ATACCGAGAA ATGGCTGGCA
TTCGGTACGC TGGATTACGA CATCACGCCG TCCACAACGG CGAATATTTA TGTTGCCCAC
CAGCAGGACA ACTCGTCGGC TTTCAGCGGC TTGCCGGCTT ATACCAACGG ACGCTTCCTC
AATGTCGACC GCTCCTTCAA CCCCTATCCG GACTGGGGGC GCATGGAGTG GAATACGACC
GATCTCGGGG CCGACCTGAC GCACAAGTTC GACAGCGGCT GGACCGTGAC TGGCCGTGTG
CTGCGCCGCA AGCAAACCCA GTTCTTCAAG GATGCCTATC CGGCCGATGG CGTGAACCCG
GCAAACAGCG TGATTTCCAG CTATATCCGT CGCGAGTTCG ACTACGAATA CGACATGGAT
AACGTGGATG TCTATGCCGC CGGTCCGTTC CAACTGTTTG GCCGGCGCCA TAACCTGATG
CTGGGGGCCA ATTACTCCAA CTTCTTCAGC CACGGCGTGG GCGCCAATGC ATCCTCCCCG
GGCAGCAGCT ATCTTCGCGT CAATAACATC CTGTTGTCCG ACCCGCCGGT GGTCGTCGAG
CCCAACGTCA TCTACACAAC GGGCAGCGAA AATGAAACGA CGCAATCCGG TTTCTACGGC
CAGTTGCGTC TCAGCGTCGT CGATCCGCTC ACCGTCGTTC TCGGTGGCCG CTTGTCCGAT
TACAACTACA AGTCGCGCAC CATTTCCCCC AACCCGACGC CGACCAACTG GGCGCAAGGC
GGGCGTGAAA CCGGCCAATT TACGCCGTAT GCGGGCTTGC TCTACGACGT GAATAAGTAC
CTGACGCTCT ACGCCAGCTA CTCGGATATC TTCGCGCCGC AGACCAGCAA ACAGGTCGAT
AACACCGTTC TGGAACCCCG GGTCGGGCGG CAGTACGAAG TGGGCGCCAA GACGGAGCTG
GTCGATGGCA AGTTGGCGGT CAACCTCGGC GTGTTCAATA TCCGGGACAA GAATCGCGCC
TTTGCCGATG CCAACAATCC CGGCTACTAC ATTGCGGCCG GAGAACTCGA AAGCAAGGGC
TGGGAGGTCG AGGTGGTCGG GCGGCCGGCG CAAGGCTGGG ATATTTCGGG CAGCTACACG
CGCCTCGATA CCGAGTTCCT GAAGGATTCC ACGCGCCAGG GGCAGCCGGT CAGTCTCTGG
TACCCCAAGA CGCAATTCAA ATTGTGGAAC AAGTACCGCT TTGGCCAGGG CGAACTGGAA
GGGCTGAGTC TCGGCTTCGG CCTCCGCGGG GCCTCCCAGT CGGCCAGCGG AACGGCCACT
TCGACGGTCG CTGCGCGGGA ACAGAACTTC TATGCCGTTT ATGATGCCCA GATCGGCTAC
AACCTGAGTC GCGATGTGGC GGTCACGCTG TCGGCCAACA ACATCTTCGA CAAGACCTAT
TACACGCGCC TCGGTGGAAC CAATACCTAC AATTACTACG GCGACCCGCG AAACTTCGCG
CTGACGCTGC GAGTGCGTTA CTGA
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| Protein sequence | MPRPLHLALL VSAIWAGSAF AQSKSFDLPA QGLGSALTAL AKQGGIQILF DADALKGKQA
SMLRGSYSAD EALGKLLSGS GFQAVSTGKA TYAIQKRPPA EGAPNVLGEV TVTATPERSY
KADKVSVAGK MPLTLREIPN SVSVLTREQM DDQNMVTVWD AMSQMPGVQA IANDISQGQY
HSRGAALDVQ FDGAPSTLPL SGYQQFDLAM YERIEVLRGP SGFVQGSGAI SGTVNFVRKR
AEKEFASRFL ASTGSWNNNR LEADVTGGLA QDGRLRGRAV FSYVDRDYVF NRVHTEKWLA
FGTLDYDITP STTANIYVAH QQDNSSAFSG LPAYTNGRFL NVDRSFNPYP DWGRMEWNTT
DLGADLTHKF DSGWTVTGRV LRRKQTQFFK DAYPADGVNP ANSVISSYIR REFDYEYDMD
NVDVYAAGPF QLFGRRHNLM LGANYSNFFS HGVGANASSP GSSYLRVNNI LLSDPPVVVE
PNVIYTTGSE NETTQSGFYG QLRLSVVDPL TVVLGGRLSD YNYKSRTISP NPTPTNWAQG
GRETGQFTPY AGLLYDVNKY LTLYASYSDI FAPQTSKQVD NTVLEPRVGR QYEVGAKTEL
VDGKLAVNLG VFNIRDKNRA FADANNPGYY IAAGELESKG WEVEVVGRPA QGWDISGSYT
RLDTEFLKDS TRQGQPVSLW YPKTQFKLWN KYRFGQGELE GLSLGFGLRG ASQSASGTAT
STVAAREQNF YAVYDAQIGY NLSRDVAVTL SANNIFDKTY YTRLGGTNTY NYYGDPRNFA
LTLRVRY
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