Gene Daro_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1330 
Symbol 
ID3569259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1446842 
End bp1448044 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content50% 
IMG OID637679798 
Productresponse regulator receiver 
Protein accessionYP_284549 
Protein GI71906962 
COG category[T] Signal transduction mechanisms 
COG ID[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones75 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000269356 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGTGGGG ATGCCATGGC CGCTCTAAGG GCGGCTCTGT CGTCTGCAGT GGTATTGGGA 
ACGTTGACCA GGCGGACTGC TTGGCGACTC CAGTGCAAAC GGCTGGCATC CGTTACGGGA
TTAGTGGCGT CTGCCATCAA GCAGCAAACC GCATTTTGTG GCCCTCTAAG ACAACCGTCG
CTGCAGCACG AGGAGCGCGA GGGTCGATCT TTGCTTGGGG CTTATACGGC CGAGATCCCG
GGAATGGGCA GCCGTACTCA CCCGGACTTT TCCCTTGGCC AGAACTCGAC ATGTGTGCAA
GGCAACATAG TCATCCGTAG GCGAAACATG CAAACCAACG GAACTGCAGA GCACTTATTT
GCTCAAACGC TCATGGAAAT CCATAAGGAA GTAAATCCAG TTTCAACCTA CTCCACACAC
GAGCAAGAAA TCGTTGCGAT GTTCGACGCG TTCTTGGGGG CAGACTATTC GCAAGAGAAG
AAGCGTGCTG TCCTTGCTGC CCAAAAATTA CTTCATCAGC ACCAAGCGAT AGCTACTCAA
CAACTTGAGA ACGGTGACCT GTTAGCTACG GAGTATGTCG ACAGATTCAA TAACCTGCTG
TCCTTAATGT TTAAAGAATG CGAATCGGTG CTAGGTTCGG AGGACTTCGT CATGTTGTTT
GGAGCCCCTC CGGATGAGAT GCAAGGATTC ATAGACAAGG AATTGTTCTT ACAGCAAAGA
GAAATTGGTA CGGACGTAAT TTTGCCGCAC ACATTTGAGG GGCTTCCTGT AGCGGACGAA
GGTAAAGTGA CCCAACCAGT CACCATTGAA CGCCTCAGCA TTGAGCAGGA ACCCAAGAAG
ACGATTTTAG TTGTGGACGA CTCCAAAGTG ACACGTGCCA ATTTGCAACG AATGCTCGAA
CGGTTCGGGT TCCGCGTCGA GGCAGCCGAA AATGGTTGGT TGGCATTAGG GCATCTTGCA
AACTACACTC AGCTTCCAGA TCTCGTTCTC GTCGACTTAA CGATGCCGGT GATGGATGGA
TATGAATTGA CTAGGCAGAT TCGCCGCAAT CCGCATACTT GCCAGCTGCC GATAATCATG
ATTAGCCCAA ATACGACCGA CTCAGCAAAG AACAAATCAG TAAAGCTGGG GATGGAACTA
TTGAATAAAA AGTCCGGCGC TAATGAGTTA GTTTCAAGAG TTCACTCGGC TTTGTCGCGT
TAG
 
Protein sequence
MCGDAMAALR AALSSAVVLG TLTRRTAWRL QCKRLASVTG LVASAIKQQT AFCGPLRQPS 
LQHEEREGRS LLGAYTAEIP GMGSRTHPDF SLGQNSTCVQ GNIVIRRRNM QTNGTAEHLF
AQTLMEIHKE VNPVSTYSTH EQEIVAMFDA FLGADYSQEK KRAVLAAQKL LHQHQAIATQ
QLENGDLLAT EYVDRFNNLL SLMFKECESV LGSEDFVMLF GAPPDEMQGF IDKELFLQQR
EIGTDVILPH TFEGLPVADE GKVTQPVTIE RLSIEQEPKK TILVVDDSKV TRANLQRMLE
RFGFRVEAAE NGWLALGHLA NYTQLPDLVL VDLTMPVMDG YELTRQIRRN PHTCQLPIIM
ISPNTTDSAK NKSVKLGMEL LNKKSGANEL VSRVHSALSR