| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1165 |
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| Symbol | |
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| ID | 3569291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1269411 |
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| End bp | 1270799 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637679632 |
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| Product | Outer membrane efflux protein |
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| Protein accession | YP_284391 |
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| Protein GI | 71906804 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTTT TACCTTGCTT TTTCCTGTTG AGCGCCAGCT GTCTGTCAGC ATGGGCCGGC
GGGCTCAATG ATCCGTTCGC TACCGATGCC ATGGTGCCGC TCAAGCCATC GCCAGCGTTG
TCGGCTCGGG TCGGCGAGGC GGCGTGCGCA ACGGCATTGC CGGCCGGTGC GCTGACGGCC
GTCGATGCCG TCGATCTGGC CCTGTGCAAT CACCCGCAGA CGCGGGAAGT CTGGGCTGCT
GCCCGGGCGC AGGCGGCACT GCTTGGCGTG GCGAAGGCGG GTTGGTTGCC GACGCTCACC
GGGACTGCGG GTTCAACCCG TTTCGAATAT GAAAACAGCG CCTATACCCG GAATACGGCG
GCGCTGACCC TCTCCTGGCT GCTCTATGAT TTCGGCCAGC GTTCAGCCAA TGTCGAGAAT
GCACAGCAAC TGTTGAACGC CGCTGCGGCC ACTCAGGATG CGACCGTGCA GAGCTTGTTC
CTGGCCGCAT TGCAGGGCTA TTACTCGGCG CAGGCGACGC AGGCGGCGGT GGTTTCTGCC
CTTGAGGCCG AGCGTTCGGC GCGCGAGAGC TATCAGGCGG CCGATGCTCG CTATGGTGTT
GGCGTGGCGA CGCCGGCTGA CCGTTTGCAG GCGCAGACGG CTTTTTCACA GGCCACGCTG
AACCGTATTC GGGCCGAAGG GGATGCCCGC AATGCCTTGG GCACGCTGGC CAATGCGCTG
GGTTTTGAGG CGCAGCTAAG GATCGTCCTG GCAGAATTGC CGGCGGCGCC AACCGGGGTG
GTTTTTCAGA AGGAAGTTGA TGCGCTGATT GCCGAGGCCC AGACGCGGCG ACCGGACTTG
CGGGCCGCCG AGGCCCAGCT CAAGGCTGCC GAGGCCAGTA TCGATCTGGC CCGCGCCCAG
GGGCGGCCGA CCATTTCGCT GGGGGCAGGG CCAAGCTGGC AGGATTCGGC TGGCGTGATC
ACGCAGGGCG GCAGCGTCGG GCTGACCTTG AGCGTTCCGA TCTTTTCCGG CTTCGATACC
ACCTATCGGG TGCGCTCGGC GTCGGCGCAG GCCGATGTCC GGACCGCCCA GCGCGACCGG
ATCCGGAACC AGATCGCGCT TGACGTCTGG AAGGCCTACC AAAGCCTGAC GACCGCAACC
CAAAGCCTGA AGACGACGGC TGACCTGGTG GCCAGTGCCG AGCAGTCGGC GCAGGTTGCG
CTCGGCCGCT ACAAGGCCGG TGTCGGCACG GTACTCGACT TGCTGTCGGC GCAAAGTGCG
CTGGCCAGTG CACGTCTGCA GCGCATCCAG GCACAACTGG ACTGGAATGT TTATCGCGCC
ACGCTGGCCC AGGCCATGGG CGCACTTGAT TACACGCTGC TGCAACCGGC AGCGGAAGGA
AGACCATGA
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| Protein sequence | MRFLPCFFLL SASCLSAWAG GLNDPFATDA MVPLKPSPAL SARVGEAACA TALPAGALTA
VDAVDLALCN HPQTREVWAA ARAQAALLGV AKAGWLPTLT GTAGSTRFEY ENSAYTRNTA
ALTLSWLLYD FGQRSANVEN AQQLLNAAAA TQDATVQSLF LAALQGYYSA QATQAAVVSA
LEAERSARES YQAADARYGV GVATPADRLQ AQTAFSQATL NRIRAEGDAR NALGTLANAL
GFEAQLRIVL AELPAAPTGV VFQKEVDALI AEAQTRRPDL RAAEAQLKAA EASIDLARAQ
GRPTISLGAG PSWQDSAGVI TQGGSVGLTL SVPIFSGFDT TYRVRSASAQ ADVRTAQRDR
IRNQIALDVW KAYQSLTTAT QSLKTTADLV ASAEQSAQVA LGRYKAGVGT VLDLLSAQSA
LASARLQRIQ AQLDWNVYRA TLAQAMGALD YTLLQPAAEG RP
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