| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0896 |
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| Symbol | |
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| ID | 3569998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 969199 |
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| End bp | 970857 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637679354 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_284122 |
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| Protein GI | 71906535 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.0104602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATCA AACTCGTCCA GTCGACGGTT TCCGCCTATC AGTATCCGCT GCTGATCAAG
CAGTTGCTGC TGACGCCGCT GGCCATTGCG CCGGAGCAGG AGATTACCTA TCAGGGCAAA
CTGCGCTACA ACTACCGGAC GCTGAACGAG CGGATCGGCC GCTTGGCCAA TGTGCTGACC
GGCCTGGGGG TTGAGTCCGG GCAGACGGTG GCGATGATGG ACTGGGACAG CCATCGCTAC
CTCGAATGCT TCTTTGCCGT GCCGATGATG GGCGCCATCC TGCAGACCGT GAATGTGCGG
CTCAGTCCGG AGCAGATTCT CTACACGCTG AACCACGCCA AGGCTGATGT GCTGCTGGTC
AATAGCGAGT TCTTCGCGAT CCTGACGCAG ATTGCGGGGC AACTTGAAAC GGTGAAGACC
ATCATTCTGA TCAGCGACGA GGCCGAACTC CCGATTGCTC CGGTGGCGAT GGTGGGCGAA
TACGAAGCCC TGCTGGCTGA GGCTTCTCCG GACTACGACT TCCCGGATTT CGACGAAAAC
GCACAGGCGA CGACCTTCTA TACGACGGGC ACGACTGGCA ATCCGAAAGG CGTCTATTTC
AGCCATCGCC AGCTCGTGCT GCACACGCTG GGCTGCGCCG CAGCGCTGGG CGGGGCCAAC
CGGCAGGGTC ATATCCACCG CGAAGATGTG TATATGCCGA TGACGCCGAT GTTCCACGTC
CATGCCTGGG GCTTTCCGTA TCTGGCGACG ATGATGGGCG TCAAGCAGGT TTATCCCGGT
CGTTACCAGC CGGAAGTGAT TTGCCGCCTG ATCAGCACGG AGGGCGTCAG CTTCTCGCAT
TGCGTACCAA CCATCCTGCA CATGATTCTC AGCCATCCGC ATGCAAAGAC CGCCGATTTC
ACCGGCCTGA AAATTCTGAT TGGCGGCGCT GCCATGCCGG AAGCCATGGC CATTTCTGCC
CAGAAGCGTG GGATGGATCT GTTCACCGGC TACGGCATGT CGGAAACCTG CCCGGTGCTC
AGCATGGCGC ATCTCGAAAG CGCCGACCTC AATCGTTCCC TGGAAGAGCA GGCGGTGATC
CGCGCCAAGA CCGGGCGGCC GTTGCCGCTG GTCGATCTGC GCATCGTCGA TCCGGAGATG
GCCGATGTGC CGCATGACGG CAAGGCGACT GGAGAAGTGG TGGTGCGCGC GCCGTGGCTG
ACCCAGGGCT ATGTCAGCGC ACCGGAGGAT TCAGAAGGCT TGTGGGCGGG CGGTTATTTG
CACACCGCCG ATATCGGCAA TATCAACCCG GCCGGCTACC TGAAGGTCAC CGACCGCATC
AAGGATGTAA TCAAGACCGG TGGTGAATGG ACTTCTTCGC TGCAACTGGA AGACATCATC
GCCAAGCACG AGGCGGTCAA TGAAGTGGCG GTCATCGGCG TGCCGGACGA CAAGTGGGGT
GAGCGCCCAC TCGCCTTGGT GCTGCTCAAA CCGGAGCATG TTGGCCAGAT TACCGAGCAT
GCCTTGCGCA ACTATGCGGC CCATGCCATC GAGGCCGCCG GTATTTCGCG CTACGGCGTG
CTGTTGCAGG TCAGTTTCGT CAAGACGCTG GTCAAGACCA GTGTCGGCAA GATGAACAAG
CGGCTGATGC GGGCCGATCC GGACGCCCTG CGCATGTAA
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| Protein sequence | MPIKLVQSTV SAYQYPLLIK QLLLTPLAIA PEQEITYQGK LRYNYRTLNE RIGRLANVLT
GLGVESGQTV AMMDWDSHRY LECFFAVPMM GAILQTVNVR LSPEQILYTL NHAKADVLLV
NSEFFAILTQ IAGQLETVKT IILISDEAEL PIAPVAMVGE YEALLAEASP DYDFPDFDEN
AQATTFYTTG TTGNPKGVYF SHRQLVLHTL GCAAALGGAN RQGHIHREDV YMPMTPMFHV
HAWGFPYLAT MMGVKQVYPG RYQPEVICRL ISTEGVSFSH CVPTILHMIL SHPHAKTADF
TGLKILIGGA AMPEAMAISA QKRGMDLFTG YGMSETCPVL SMAHLESADL NRSLEEQAVI
RAKTGRPLPL VDLRIVDPEM ADVPHDGKAT GEVVVRAPWL TQGYVSAPED SEGLWAGGYL
HTADIGNINP AGYLKVTDRI KDVIKTGGEW TSSLQLEDII AKHEAVNEVA VIGVPDDKWG
ERPLALVLLK PEHVGQITEH ALRNYAAHAI EAAGISRYGV LLQVSFVKTL VKTSVGKMNK
RLMRADPDAL RM
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