| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0885 |
|---|
| Symbol | |
|---|
| ID | 3569948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 957239 |
|---|
| End bp | 957802 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637679343 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_284111 |
|---|
| Protein GI | 71906524 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 0.956443 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.112508 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCATTG ATCGCTTTCG GCGTCGCCAA TTCGGCGTTT CACTGGTTGA GCTGATTGTT
TTCATTGTGA TTGTCAGCGT CGGAGTGGTT GGCTTGGTGT CGGTGATGAA TCCACTGGTG
CGTTACAGTG CAGATCCGAT GGAAACCAAG CAATCTATGG CCATTGCCGA GTCGTTGCTC
AATGAGATTT TGCATCAGCC ATTCACGTGG TGTGATCCGG ACGATGCTGC GGCATCGACG
GCACAGCAGT ATGCCGATTG TGCCAACCCG CAGAATGTCA GCGGTGCGAC GCCGTCCACA
GAGACAAGTC GTTCCGGCAG CGGGCCGGGA ACGGCTTACG ACAATGTGGC GGACTACGAT
GGCTTCTCCA AAAACAATAT CGATGACGCT TCCGGTGGTA ATGCCATGAC GGGTTATACG
GCAGGCGTTG CGGTTGCTCG GGCCGGAATC GCCTTGGGGC TGGCCGACGA TACTGCCGCC
TTGAGCGTGA CCGTGACGGT GAGTCGTAAT GGGCATTCAT TTTCCTTGAC GGGCTATCGC
TTCCGCTATG CGCCGCGCTA CTGA
|
|---|
| Protein sequence | MCIDRFRRRQ FGVSLVELIV FIVIVSVGVV GLVSVMNPLV RYSADPMETK QSMAIAESLL
NEILHQPFTW CDPDDAAAST AQQYADCANP QNVSGATPST ETSRSGSGPG TAYDNVADYD
GFSKNNIDDA SGGNAMTGYT AGVAVARAGI ALGLADDTAA LSVTVTVSRN GHSFSLTGYR
FRYAPRY
|
|---|
| |