| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0880 |
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| Symbol | |
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| ID | 3569943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 953947 |
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| End bp | 955167 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637679338 |
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| Product | type II secretion system protein |
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| Protein accession | YP_284106 |
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| Protein GI | 71906519 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.12464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCAACT TCGCCTACAG GGGACGGGAC GCCAGCGGCA AGCTGATCGA AGGCGTGCTC
GAAGGCGCAT CGGCGGGTGG GGTTGCCGAT CTCTTGCTCG GGCGGGGTGT GACGCCGGTT
TCCATTCAGG AAAGCACATC GAAAGGCAGT CCCGGCGCCG AATTAAATCT GTTCAAACCC
AGGGTTCAGC ACGTCGATAT CCTGCTCTTT TCGCGGCAAC TGCATACCCT GCTCAAATCA
GGCGTGCCGA TCATGCGTGC GCTGAGTGGC CTGCAGGAGT CGGCCACCAA TCAGGCCATG
AGGGAAGTGA TCCGCGATGT TCGCGAGAGC CTGGAGGCCG GCCGCGAATT GTCGGTATCG
CTGGCCCGCC ATCCCAAGGT ATTCAACTCC TTTTATATTT CCATGGTGCG GGTCGGCGAA
GCCACTGGCC TGCTCGACGA GATTTTTCTG CGGCTGTTCG AGCATCTGGA GTTCGAGCGC
TACATGCGCG AGCAAGTCAA ATCGGCCCTG CGTTACCCGA TGTTCGTGGT CATCGCGATG
GCTGTGGCTA TCGTTGTCGT CAATATTTTC GTTATCCCGG CCTTTGCCAA GGTCTTTCAG
GGCTTTGGCG CCGAACTGCC GCTGATGACC AGGATTCTGC TCGGCTTTTC CGATTTCATG
GTGGCCTGGT GGCCGGCCAT GCTGATCGGC CTTGTCGTTG CGGTGCTGGC GTTTCGTTCC
TGGATCGGTA CGGTGGCCGG GCGGATGCAG TGGGAGTCCA TCGTCCTGCG TTTTCCGATT
GCCGGAAAAA TCGTCCGCAA GGCAGCAATG GCAAGGTTTT CCCGCAGCTT TGCGTTGGGA
ACGCGCAGTG GCGTTCCGGT CATGCAAGCC TTGACCAATT CGTCGCAAAC CGTCGATAAC
AGCTATATCG CAGCCAAGAT CGAAGGCATG CGCGATACGG TCGAACGCGG CGAAAGCGTG
CTGCGGGCGG CCATCGCTTC CGGATTCTTT TCGCCGGTGG TCCTGCAGAT GGTGGCGGTT
GGAGAGGAAT CAGGGGCGCT CGACGACATG ATGGAAGAGG TTGGCCAGAT GTACCAGCGC
GAGGTGGAGT ACGAACTGAA GACGCTCGGG CAGCAGATTG AGCCTATCCT GATTGTCTGT
CTTGGCGCGC TGGTGCTGGT TCTGGCGCTC GGTATCTTCC TGCCGATGTG GGATCTCGGC
AAGGTGGCCA TCAAGCGATG A
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| Protein sequence | MANFAYRGRD ASGKLIEGVL EGASAGGVAD LLLGRGVTPV SIQESTSKGS PGAELNLFKP
RVQHVDILLF SRQLHTLLKS GVPIMRALSG LQESATNQAM REVIRDVRES LEAGRELSVS
LARHPKVFNS FYISMVRVGE ATGLLDEIFL RLFEHLEFER YMREQVKSAL RYPMFVVIAM
AVAIVVVNIF VIPAFAKVFQ GFGAELPLMT RILLGFSDFM VAWWPAMLIG LVVAVLAFRS
WIGTVAGRMQ WESIVLRFPI AGKIVRKAAM ARFSRSFALG TRSGVPVMQA LTNSSQTVDN
SYIAAKIEGM RDTVERGESV LRAAIASGFF SPVVLQMVAV GEESGALDDM MEEVGQMYQR
EVEYELKTLG QQIEPILIVC LGALVLVLAL GIFLPMWDLG KVAIKR
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