| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0707 |
|---|
| Symbol | |
|---|
| ID | 3569019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 775780 |
|---|
| End bp | 776409 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637679155 |
|---|
| Product | PBP family phospholipid-binding protein |
|---|
| Protein accession | YP_283933 |
|---|
| Protein GI | 71906346 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1881] Phospholipid-binding protein |
|---|
| TIGRFAM ID | [TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 69 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.148396 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGA CCAGTGGCAG TTTTGCCGAC GGACAAACAA TCCCGGGGGA TTACTCCTTC
TGCATTCCGG ACCCGGCTCA TCACGTCTGC CTGGGAAGCA ACAAGAATCC CCAGCTATCC
TGGAGCGACG TTCCGGCCGG GACCAAATCA TTTGCTGTCA TCTGCCATGA TCCGGATGTT
CCCAGCCAGG GAGACGACGT TAATCAGGAG GGGCGAAGCG TCCCTGCTTC TTTGCCGCGT
GTCGACTTTT TCCACTGGGT TCTGATTGAT CTGCCTGCCT CGATCACCAG CCTGAAAGAA
GGCGAATTCA GCGGCGAAGT CACACCGCGT GGCAAGCCGG GGCCACAGGC CGCTTACGGC
GCCCGCCAGG GCATCAACAA CTACACGGAC TGGTTTGCCG GCGACAACGA CATGCGGGGC
GACTACTACG GCTACGACGG CCCGTGCCCG CCCTGGAACG ATGAAATCAT CCATCGCTAC
GTTTTCACGG TCTATGCGCT GGATATCGAG CAATTGCCGC TTGCCGGCAA ATTTGGCGGC
CCGGAAGCCC GCGCCGCCAT TCAGGGGCAC ATCCTGGCCG AAGCCTGCCT GATCGGAACC
TATACCCTGA ACCGCAAGCT GCTGGGTTAA
|
|---|
| Protein sequence | MKLTSGSFAD GQTIPGDYSF CIPDPAHHVC LGSNKNPQLS WSDVPAGTKS FAVICHDPDV
PSQGDDVNQE GRSVPASLPR VDFFHWVLID LPASITSLKE GEFSGEVTPR GKPGPQAAYG
ARQGINNYTD WFAGDNDMRG DYYGYDGPCP PWNDEIIHRY VFTVYALDIE QLPLAGKFGG
PEARAAIQGH ILAEACLIGT YTLNRKLLG
|
|---|
| |