| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0686 |
|---|
| Symbol | |
|---|
| ID | 3568979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 757449 |
|---|
| End bp | 758060 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637679134 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_283912 |
|---|
| Protein GI | 71906325 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4566] Response regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 79 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCCTA AACATGATCT GACCGTATTT ATCGTTGATG ACGACGCTTC CGTTCGCGAT
GCGCTTGCCC TTCTATTCAG TGTTCGCGGC TATCGAACAG CGATTTTTTC TGGGGCACCA
GACTTCTTGA AGGCGTGGCA GGCAGATTGG ACGGGGTGTC TACTGATCGA CATTCGGATG
CCTGTCATGG ATGGGTTGTC GTTACAGGAA CGGCTAATCG AGATGGGCTG CACCTTGCCC
GTGGTTGTCA TCACCGGTCA TGGCGACGTC GAATCAGCAC GGCGAGCATT CAAGTCGAAC
GCAATCGATT TTCTTGAAAA GCCGATTGAT CACGACAAGA TGCTTGAAGC TATCGAGCAG
GCATTTAATT CGCAAAGTTT GATGCAAGAT CGGAAGTCGG CGAGTGAAAA AGCGAACTAT
CTCCTGGGTC AGTTGACCCC GCGTGAGCAG GAGGTCATGA ATCTCGTGGT CGGTGGTTAT
CACAACCGCG AAATTGCCGA AAAGCTCGGG ATTAGTGTCC GCACGGTTGA GGTGCACAAG
GCTCATGTGA TGTCGAAACT GGACGTCGAT AGCGTTGCAG ACCTCGTGAG GTTGAGTATG
CATGGAAGCT GA
|
|---|
| Protein sequence | MMPKHDLTVF IVDDDASVRD ALALLFSVRG YRTAIFSGAP DFLKAWQADW TGCLLIDIRM
PVMDGLSLQE RLIEMGCTLP VVVITGHGDV ESARRAFKSN AIDFLEKPID HDKMLEAIEQ
AFNSQSLMQD RKSASEKANY LLGQLTPREQ EVMNLVVGGY HNREIAEKLG ISVRTVEVHK
AHVMSKLDVD SVADLVRLSM HGS
|
|---|
| |