| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0643 |
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| Symbol | |
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| ID | 3568910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 706428 |
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| End bp | 707039 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637679086 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_283870 |
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| Protein GI | 71906283 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 59 |
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| Plasmid unclonability p-value | 0.849619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.524182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCGCC TGATCGCGGC CCTGCTTTTT TGTGGCGCGT CGGCGGCCCA CGCCGGCGCG
CAGAAGTACG AGGTACTGTC GGCCAGCGCG CAGGCCGCCC TGCACAAGGC AGTTTCGGAC
TCACGCCCGG CCGTCAGCTC GTTCAAGACG CCCATGGAGG CGGTCGACTG GCTGGCCGCC
ATGTCACCCC GTCTGGAAAA ACGCATTCCG AACCGTGACT ATCGTATCGA CCTGCTGCGC
AGCGTGCACT ATGAGGCAAC GCGGGCCGGC CTGGATCCAC AACTGGTACT CGGGCTGATG
CAGGTCGAAT CCGGGTTCCG CAAGTACGCC GTCTCATCAG CCGGTGCCCG CGGTTACATG
CAGGTCATGC CCTTCTGGGT CAAGATCATC GGCCGGCCGG ACGACAACCT GTTCGACCTA
CGCACCAGCC TGCGCTATGG CTGCACCATC CTGCGCCACT ATCTGGACAT CGAAAAGGGG
GACCTTTTCC GCGCCCTAGG CCGCTACAAC GGCAGCCTGG GTAAGCCGGA GTATCCAAAC
ATGGTTCGCG CCGCCTGGCA AAACCAGTGG GGCTACGAAA AAACGGCCCG CTTGGCGCAG
GCCGCGCGCT AA
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| Protein sequence | MRRLIAALLF CGASAAHAGA QKYEVLSASA QAALHKAVSD SRPAVSSFKT PMEAVDWLAA
MSPRLEKRIP NRDYRIDLLR SVHYEATRAG LDPQLVLGLM QVESGFRKYA VSSAGARGYM
QVMPFWVKII GRPDDNLFDL RTSLRYGCTI LRHYLDIEKG DLFRALGRYN GSLGKPEYPN
MVRAAWQNQW GYEKTARLAQ AAR
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