Gene Daro_0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0494 
Symbol 
ID3570218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp556734 
End bp557957 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content68% 
IMG OID637678936 
Productmajor facilitator transporter 
Protein accessionYP_283721 
Protein GI71906134 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.520669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCT CCCGCATCCT CGCCTATGGC CTGCTCGGGC TTCCGCTGGC CTTTGCCGCC 
CTGCCCATCT ACGTCCACGT CCCGCGTTTC TACGCAGAAA CAGCCGGCCT GCCGCTGGCG
CTGCTCGGCT TCATCCTGCT CGGCGCCCGG TTGCTCGACG CCGGGATCGA CCCCTGGCTG
GGCTGGCTGG CCGACCGCGT ATCGCGGCGG CGCATGGTGG CGCTGGCTTT GCTGCCGTTC
GGGCTCGGTT TCGTCGCCCT GCTCAATCCG CCCGCTGAAA ATGTCGGGCT CTGGCTGCTC
GCCTCGCTGG CCCTGACTTA CCTCGGTTTT TCCGCAGCGA CCGTCGCCTA TCAGGCCTGG
GGGGCGGATG TGGGCATCAA CTCGGCACTA CGCACCCGGC TGACCGCTGC TCGGGAAGGT
TTTGGCCTGC TCGGCGTCGT GCTCGCCGCC GCGTTGCCGA CGGTGCTTGC CGCCAGCCTG
AACGATGGCA TCGCCCGGCT GAGCTGGGTA TTGCCCCCCT TGCTGCTGAT CGCGGCCGCC
ACGACCTTTT CCCGGGTCGG GGTCGGGCAG CCTTTGCCGG CCAGCAATCA GGCGCTCCTG
CCCAGCCTGC GCCGCGTCTT TGCCGATCTG GCCTTCCGTC GCCTGCTGCT GGTTTTTGTC
GTCAATGGCA TTGCCGCGGC GCTGCCAGCG ACGCTCTTCC TCTTTTTTGT CGCCGATGTC
TTGCAGGCCG AAGCCAACAG CGGAGCGTTG CTGGCCTTGT ATTTCATTGC CGGTGCCGCG
TCCTTACCCG TGTGGGTGCG CCTGGCCGGC CGCATTGGTC GGGTCGCCGC CTGGGGGCTG
GCCATGGGGC TGGCGATCCT GGCTTTCGCC GGGGCCAGTC TGCTCGGCGC TCATGATGTC
GCCACGTTTG CCGCTATCTG TGTCATTTCC GGGCTGACGC TCGGTGCCGA TCTGGCGCTG
CCGTCAGCGA TCGCCGCCGA TCTTGGCGAG CGTCAGGGGC AGCCGGGGGC CTGCTTTGGC
GTCTGGAACT TTGTCTCGAA ACTCAACCTG GCGCTGGCCG CCGGGCTTTC CCTGCCCTTG
CTGGCGCTGC TCGGCTACGT GCCGGGCAGT AGTGCCGGTC TGCCGGCGCT GACCTTTGCC
TACGCCCTGT TACCGCTCGC TTTCAAGGCG CTGGCCGCGG CCCTGCTCTG GCGCTGGCGC
CATTCCCTGG AGTCTGAATC ATGA
 
Protein sequence
MTPSRILAYG LLGLPLAFAA LPIYVHVPRF YAETAGLPLA LLGFILLGAR LLDAGIDPWL 
GWLADRVSRR RMVALALLPF GLGFVALLNP PAENVGLWLL ASLALTYLGF SAATVAYQAW
GADVGINSAL RTRLTAAREG FGLLGVVLAA ALPTVLAASL NDGIARLSWV LPPLLLIAAA
TTFSRVGVGQ PLPASNQALL PSLRRVFADL AFRRLLLVFV VNGIAAALPA TLFLFFVADV
LQAEANSGAL LALYFIAGAA SLPVWVRLAG RIGRVAAWGL AMGLAILAFA GASLLGAHDV
ATFAAICVIS GLTLGADLAL PSAIAADLGE RQGQPGACFG VWNFVSKLNL ALAAGLSLPL
LALLGYVPGS SAGLPALTFA YALLPLAFKA LAAALLWRWR HSLESES