| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0488 |
|---|
| Symbol | |
|---|
| ID | 3570212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 550893 |
|---|
| End bp | 551450 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637678930 |
|---|
| Product | glutathione peroxidase |
|---|
| Protein accession | YP_283715 |
|---|
| Protein GI | 71906128 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0386] Glutathione peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 0.642227 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTCTA GCCTGAAACG CTGCTTTGGA ATTGCCGCCC TGATTACGGT GGGGGTCGTG
CCTGTTGCGG CTGCCGCTGA ATGCCCGCCA CTGCTCAATC ACAGCTTCGC CAGCCTGCAG
GATGGCAAGC CGATGCCGCT CTGCCAGTAC GCCGGCAAGG TCATTCTGGT CGTCAATACG
GCCAGCTACT GCGGTTTCAC CTCGCAATAC GACGGGCTGG AAAAGCTGTA TGCCCGGCTC
AAGGACAAGG GCCTGGTGGT GCTTGGTTTT CCATCCAATG ACTTTGGCGA ACAGGAACCG
GGCAGCGAGA AGGAAATTGC CGATTTCTGC CGGCTGACCT ACGGCGTCGA GTTTCCGATG
GTCAGCAAGA CGGTGGTCAA GGGCAAGGGC GCTCACCCGT TCTACCTGAA GCTGGCCGAG
ATCACCGGCA GCAAGCCGAA GTGGAATTTC CACAAGTACC TGATCAACCG CGATGCGACG
CAAGTTGTTG CCTACACCAG CTTCACCAAG CCGGATGACA AGGACTTGCT GAAGAAAATC
GACGAATTCC TCAAATAA
|
|---|
| Protein sequence | MFSSLKRCFG IAALITVGVV PVAAAAECPP LLNHSFASLQ DGKPMPLCQY AGKVILVVNT
ASYCGFTSQY DGLEKLYARL KDKGLVVLGF PSNDFGEQEP GSEKEIADFC RLTYGVEFPM
VSKTVVKGKG AHPFYLKLAE ITGSKPKWNF HKYLINRDAT QVVAYTSFTK PDDKDLLKKI
DEFLK
|
|---|
| |