Gene Daro_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0474 
Symbol 
ID3569139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp534258 
End bp535043 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content60% 
IMG OID637678916 
Productpeptidase M48, Ste24p 
Protein accessionYP_283701 
Protein GI71906114 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTG TCTCGCCACT TGTCCGTGCC TTGCCTGTCG CAGCCTTGTC CGCCTTGCTC 
CTGAGTGCCT GTAGCAATAC CGGCAATTCC GTTTCTGCCG CCAATGCTGA AGGCCTGATG
AGCGCCGGCA AATCGGTTGC CCAGGCGGCT ACGTTGAGCG ACGCCGAGGT CATGCAACTG
TCCGACAAGT CCTGCGCCGA ACTCGACGGC CAGTCCAAGA TCGCGGCACC GAAAAGTAAG
TACGCCCTGC GCCTCGCCAA GATCACCAAG AGCATGCCCA AGGACGTCAA TGGCGTCGCC
ATCAGCTACA AGGTCTATGA GACCAAGGAC GTCAACGCCT GGGCCATGAA CAACGGCTGC
GTGCGCGTCT ATTCCGGTCT GATGAATTTG ATGACCGACG ACGAAATCCG TGGCGTGGTC
GGCCACGAAA TCGGGCACGT CGCGCTGGGC CACTCCAAGA AATCCATGCA GGTCGCCTAC
GCCGCCGGCG CTGCCCGCCA GATCGCAGCT GTCTCGGGTA ATTCCGCCGT TGCCGCCCTG
AGTTCTTCCG ACATTGGCGC CATTGCCGAA AAGCTGGTCA ATGCCCAATT CTCGCAAGCT
CAGGAAAGCG ACGCCGACGA TTACTCCTTC GACCTGCTGA CCGCTGCCAA GCTGAAGCGC
GAGGGCCTGA TTTCCGCCTT TGAAAAGCTC GCCAAGCTGG GTGACAGCAA CAGCATGCGG
AGTTCGCATC CATCGTCCTC CGGCCGCGCC CAGCACATCC GCGACCGCAT CGCTGCGAAG
AAGTAA
 
Protein sequence
MKFVSPLVRA LPVAALSALL LSACSNTGNS VSAANAEGLM SAGKSVAQAA TLSDAEVMQL 
SDKSCAELDG QSKIAAPKSK YALRLAKITK SMPKDVNGVA ISYKVYETKD VNAWAMNNGC
VRVYSGLMNL MTDDEIRGVV GHEIGHVALG HSKKSMQVAY AAGAARQIAA VSGNSAVAAL
SSSDIGAIAE KLVNAQFSQA QESDADDYSF DLLTAAKLKR EGLISAFEKL AKLGDSNSMR
SSHPSSSGRA QHIRDRIAAK K