Gene Daro_0364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0364 
Symbol 
ID3569667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp395978 
End bp397291 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content66% 
IMG OID637678806 
ProductABC transporter 
Protein accessionYP_283593 
Protein GI71906006 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.0199162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000063148 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGAAGCAT TACGCATCAT CACCGAAGAG CACCAGAACC TCTGGCGCAT CGCCACTACG 
CTCGACATGG TTGCCGACGA GATCGACGGC GGCGGCCACG TCGAAACGGC GTTTTTCACT
TCGCTGTTCG ATTACATCGA CCAGTTCATG GACCGCGCCC ACCACGCCAA GGAAGACAGC
TACCTGTTCC CATCCCTGCT GCGCCGTGCG CCAGAAGCCG CGGCGATCAT CGAGCGCCTG
CAGGCCGAGC ACCACAACGG CCCCGAAGTC CTGCGCGACC TGCGTGCCAA GCTGGCGGCG
ACCGCCGCCG GCAGCGAGGC CAACGCCACC TTCACGGCAG CCTTGCGCAG CTACGCGCAA
GCCGTCAAGA GCCACGTCCG CAGCGAGGAA AAGGATGTCA TGCCCCTCGC CCGCGAGGCG
CTGACCGCCG ACGACTGGGC CGATATCGAC AAGGCCTTCC TCGACAACGA CGACCCCCTG
TTCGGCAGCA AGGCGAGGGC GGAATTCCGC GAGATCTTCC ACCGCATCGT AAACCTCGCG
CCGGAACCGA TCGGCCTCGG CGGCCATAGC GGCGGCGCGC TGCAAAAGCC GATCGCCCCG
GTTGGCGACG TGCTGCTCAA GATCGAGGGA ATGGAAAGCT GCTACGGTCG GATCAAGGCG
CTGAAGGGCA TCGACCTCGA AGTGCGGCAG GGCGAACTGG TTGCGCTGGT CGGCGCCAAC
GGCGCAGGCA AGACCACCTT CCTGCGCACC CTGTCCGGCG TGCAGCCGAT GAGCGCCGGC
CGCATCATCT TCAACCGCGA GGACATTTCC GGCCTGCGCT CTGACCTGCG CATGCGCCGC
GGCATCTGCC AGAGCCCTGA AGGCCGCCAG GTCTTCGGCC CGCTGGCCAT CGAGGACAAC
CTGCGCCTGG GTGCCTACAC GCGCCCCAAG AACGACGTTG AGGGCGATCT CGAGCGAGTC
TATTCGATGT TCCCCATCCT CAAGGAGAAG CGCCATCTGC CGGCCGGCAC CTTGTCCGGC
GGCCAGCAGC AGATGCTGGC CATCGGCCGG GCGCTGATGG GTCGCCCGAA GATGCTGCTG
CTCGACGAGC CGTCGATGGG CCTCGCCCCA CTGCTGGTCG AAGAAGTCTT CAACGTCGTC
AAGGCGCTGA AGGCTCAGGG CATGACCATC TTCCTGGTCG AGCAGAACGC CTTTGCCGCG
CTGGCCATCG CCGACCGCGG CTATGTGCTG GAAACCGGCA ACATCACGCT GACCGGCACC
GGCCAGGAGC TGATCAGTAA CGAACAGGTG CGGGCGGCCT ACCTCGGGAT GTAA
 
Protein sequence
MEALRIITEE HQNLWRIATT LDMVADEIDG GGHVETAFFT SLFDYIDQFM DRAHHAKEDS 
YLFPSLLRRA PEAAAIIERL QAEHHNGPEV LRDLRAKLAA TAAGSEANAT FTAALRSYAQ
AVKSHVRSEE KDVMPLAREA LTADDWADID KAFLDNDDPL FGSKARAEFR EIFHRIVNLA
PEPIGLGGHS GGALQKPIAP VGDVLLKIEG MESCYGRIKA LKGIDLEVRQ GELVALVGAN
GAGKTTFLRT LSGVQPMSAG RIIFNREDIS GLRSDLRMRR GICQSPEGRQ VFGPLAIEDN
LRLGAYTRPK NDVEGDLERV YSMFPILKEK RHLPAGTLSG GQQQMLAIGR ALMGRPKMLL
LDEPSMGLAP LLVEEVFNVV KALKAQGMTI FLVEQNAFAA LAIADRGYVL ETGNITLTGT
GQELISNEQV RAAYLGM