| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0265 |
|---|
| Symbol | |
|---|
| ID | 3569696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 306340 |
|---|
| End bp | 308433 |
|---|
| Gene Length | 2094 bp |
|---|
| Protein Length | 697 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637678703 |
|---|
| Product | sensor histidine kinase |
|---|
| Protein accession | YP_283494 |
|---|
| Protein GI | 71905907 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGCA GAAAGCCCGA AACTCTCGCC CTGAGCATTG CACTGGTCGG CACGCTGGTG
GTTTTGCTTG TTTTTCTGGC CGACCTCGCC CTGGCACGAC ACCGCGACCT GGAATCCGGC
GAACGTCGGC TCCAGCATTT CGGTCTGATG ATGGCCGAGC ATACCGCCCG GACTTTCGAA
GCCGTCGACG TGCTGCTTCG CGAGACGGCA ACCGATCTCT CGCACAGCCG CCGCGACTGG
GAAACGTGGG ATACCAGCAA GGGCTGGGAA TACATTGCCC AGCGCCATTC GCGGGCCATG
CCGCAGCTGC GGGACCTGAT CATTTTTGAT CGGTATGGCA ACCAGCGCTT TATCTCGACC
TTCTTCCCGG CCCCCCACAT CAACGTCAAG GACCGCCCCT ATTTCATCGC GCTTGAGGAT
GGAGCTGAGT CCTCCACCTT CGGCCCCTAT ATCGGCCGCA ACAGCGGGCG TTACACCTAC
GCCATCGCCC GCCGCCTGAC CGGTGACAAC GGACATTTTG CTGGCGTCGT CTTTGCGGCC
ATGGAGCCGG CCTATCTCCA GGACTTCTGC TGGTCGAACC GGCTGTCCGA CGATTTCGAA
ACCGTCCTCA TCAACCAGAA AAGCGAAATC ATCGCCTCCT GCCGCCCCTC CGACCTCAGC
CGGCAATCGC CGATTCTCGG CGCCCAGGCC GCAGCAGTCT TGTACGGTGG CCAACTAAAG
GGTTTCATTC CGGAGAATGG CTTGACCAGC GGCAACGGTT ACCTGATCGC CGTATCCCAA
GTCCCCGGCT TTACCGACCT GCGAGTTCTC AGCGTGATCC CGGAAAAGAC ACTGCTGGCC
GCCTGGCACA ACCGCCTGTT CGAACTGGGT ACGCTGGCTC TGCTCGTCAG CATCGTCCTG
CTCGTCACCG GACTGCTGGT TCGCCGCCAG GTTCGCGACA TGGCGGCCAT GACCGAGGAA
CTGGCGGCCA GCCACGATCT GCTCGAAGAA CGCGTCCGCG AAGCTACCCA AGAGCTGGCC
GGACAGAAGA ATGCCGCCGA ACGCGCCAAC ACGGCAAAGA GTCGCTTTCT CGCGGCGGCC
AGTCACGACT TGCGCCAACC CTTGCATGCA CTATCACTGT TCGCCACTGA CCTGCAGCGC
CAGATTCGCA GCGGCACCCC GCAGGAGCTG CCCCGGCTGG CCGAACAAAT ATCAGCCTCG
ACGACCATTC TTGGCGAACT GCTCGATTCG CTGCTTGATA TCTCCCGACT CGACGTCGCC
GGCATCAAGC CCGATAGCCG CCCAACCCCG TTGCAGCCGA TCTTCGAGCG CCTCGCCAAT
TCCTTCCGGC GCGCCGCGAC CGACCGCAAT ATGAGCTTGC GTTTCCATCC GACCACGCGA
TGGGTGGAAA CCGATCCGAT CATGCTCGAA CGCATGATCG CCAATCTGGT ATCCAATGCC
TTGCGCTATA CCCCGCCCGG CGGCAGCGTG CTGGTTGCCG CCCGCAACAG GGGCGACAGG
GTGCTGATCG AAATCAGGGA TAACGGTATC GGCATTGCCC CCCAACACCA GGCCGCCATT
TTTGCCGAGT TCTACCAGGT CGGAAACACG GCCCGGGAAC AGAACAAGGG GCTGGGATTG
GGCCTGTCCA TCGTCGATCG ACTGGCCAAA GCGCTGGGGA TCGAGGTAAA GCTCAACTCA
AGGCAGGGGG AAGGAACCAA GTTCACGCTC AGCGTAGCGA GCAGCCAGCC AGTTGTTGCC
GGGCCGGCCG CAAGCGACAA ACCGCCACAA GCCGGCAAGG TTCACTGCAT CGGCACCTCG
GAAGAGATGC TGTCCTGCAT CGAACTGATG AAACGCTGGG ACTATGCCGT CAGCAGCGAT
GATGGCAGCC GGACCGAGCG CCGGCCCGAA GATGCCGTAT TGATCGCTGA ACCCGAACTC
GCCGCCGCCG CCAGTGCCGA ACTGGTGACC GGCATGCCCT TGGTTGTCCT GGTCCGTGAC
CCGGGCGCAA GCCTGCCGGC CGGGGCTCAC GCGCTGCCCG TACCAGTGCG CCCAGCCAAG
CTGCGGGCGC TACTGAACCA GCTTCAGAAG ACGCTTTCGA AATCGATGCC GTAA
|
|---|
| Protein sequence | MPSRKPETLA LSIALVGTLV VLLVFLADLA LARHRDLESG ERRLQHFGLM MAEHTARTFE
AVDVLLRETA TDLSHSRRDW ETWDTSKGWE YIAQRHSRAM PQLRDLIIFD RYGNQRFIST
FFPAPHINVK DRPYFIALED GAESSTFGPY IGRNSGRYTY AIARRLTGDN GHFAGVVFAA
MEPAYLQDFC WSNRLSDDFE TVLINQKSEI IASCRPSDLS RQSPILGAQA AAVLYGGQLK
GFIPENGLTS GNGYLIAVSQ VPGFTDLRVL SVIPEKTLLA AWHNRLFELG TLALLVSIVL
LVTGLLVRRQ VRDMAAMTEE LAASHDLLEE RVREATQELA GQKNAAERAN TAKSRFLAAA
SHDLRQPLHA LSLFATDLQR QIRSGTPQEL PRLAEQISAS TTILGELLDS LLDISRLDVA
GIKPDSRPTP LQPIFERLAN SFRRAATDRN MSLRFHPTTR WVETDPIMLE RMIANLVSNA
LRYTPPGGSV LVAARNRGDR VLIEIRDNGI GIAPQHQAAI FAEFYQVGNT AREQNKGLGL
GLSIVDRLAK ALGIEVKLNS RQGEGTKFTL SVASSQPVVA GPAASDKPPQ AGKVHCIGTS
EEMLSCIELM KRWDYAVSSD DGSRTERRPE DAVLIAEPEL AAAASAELVT GMPLVVLVRD
PGASLPAGAH ALPVPVRPAK LRALLNQLQK TLSKSMP
|
|---|
| |