Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0199 |
Symbol | |
ID | 3569894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 215659 |
End bp | 216555 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637678637 |
Product | periplasmic solute binding protein |
Protein accession | YP_283428 |
Protein GI | 71905841 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 0.254854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGA TCATTTCAAC GGTGCTGCTG ACGCTGGCCT CGCTGCCAGC CTGGGCCAAT CTCAATATCT TCGCGACGGT GCCGGAGTGG GGCGCCCTGG CCAAGGAGAT TGGGGGCGAC AAGGTGCGCG TCTATACCGC CACCAACGCC TTCCAGGATC CGCATCGCAT CGAGGCCAAG CCGTCGTTGC TCGCTCAGGC ACGGCAGGCA CAGCTGGTTA TCGCGGCCGG GGCCGATCTG GAAATCGGCT GGTTGCCCTT GGTCCTGCGT GACTCCGGGA ATTCGGCCAT TCAGACCGGC CGGCCTGGAT ATTTCGAGGC CTCCGCCTTC GTCAATCGAT TGGATGTGCC AACCACGCTG GATCGCTCCC ACGGCGATAT CCATGCGGCA GGCAACCCGC ATATTCACCT TGATCCGCGC AATGTGCTGA AGGTTGGCGA AGCGCTGACG GCACGCATGG CCGAACTGGA TGCGGCCAAT GCGGCCAGCT ATCAGGCGAC TTTCAAGGCC TTTGCTAGCA AGTGGCAGGT GGCCATCGCC CGTTGGGAAA AAGAGGCGGC GCCGCTCAGA GGACTGCCGG TACTGGTGCA TCACCAATCC TTCGTCTATC TCGATAATTG GCTGGGCTTG AAGGAAATTG GCTCGCTCGA GCCGAAGCCC GGTATTGAGC CGACCAGTGG CCATTTGACA GGCCTTCTGA CCCGTCAGCA AACTGTTCCC GCCAGGATGG TGCTGCGGGG TGCCTATCAG CAGGAAGGGC CGAGTCAGTG GATTGCCGGC AAAACGGGGA TTCCCGCGGT GCTGCTGCCT TATACCGTGG GCGGGACGCC GGAGGCCAAG GATCTGTTCG GACTGTACGA TGACACGATC CAGCGTTTGC TCAAGGGGAT ACGCTGA
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Protein sequence | MNKIISTVLL TLASLPAWAN LNIFATVPEW GALAKEIGGD KVRVYTATNA FQDPHRIEAK PSLLAQARQA QLVIAAGADL EIGWLPLVLR DSGNSAIQTG RPGYFEASAF VNRLDVPTTL DRSHGDIHAA GNPHIHLDPR NVLKVGEALT ARMAELDAAN AASYQATFKA FASKWQVAIA RWEKEAAPLR GLPVLVHHQS FVYLDNWLGL KEIGSLEPKP GIEPTSGHLT GLLTRQQTVP ARMVLRGAYQ QEGPSQWIAG KTGIPAVLLP YTVGGTPEAK DLFGLYDDTI QRLLKGIR
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