| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0184 |
|---|
| Symbol | |
|---|
| ID | 3569480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 202290 |
|---|
| End bp | 203111 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637678622 |
|---|
| Product | hemolysin A |
|---|
| Protein accession | YP_283413 |
|---|
| Protein GI | 71905826 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1189] Predicted rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 62 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGA ACTCCTTCCA CGCGCGGCAA AAAAAGCCGC GCCCAACCCC TCAGCCAGCC
CACGAACGGC CGGCCGGGGT GTTGCGGGCG GATGCCCTGC TCGTCGCCCA GAAACTGGCC
CCCTCCCGCA CCGCGGCGCA ATGGATGATC AAATCCGGAC GCGTCAGCTG GGCTGGTGGC
GCAATCAGCA AGCCTGCGCT GGAATTACCC GAAGATACAC CGCTGACCGT CACCGCCGAC
CCCGAAGCTC ATTACGTCTC GCGCGGCGGC AACAAGCTGG CCGGCGCTTT ATCTGAAACC
GGCCTCACGG TCGCAGGCAA GGTCTGCCTT GATGTTGGCC AATCAACGGG CGGTTTCACC
GACTGCCTGC TGCAGGCCGG TGCCAAACAC GTCGTTGGCG TCGATGTCGG CCACGGCCAA
CTGCACTCGC AATTGCGTCA TGACTCTGCG GTCACGGCCA TCGAAGGCGT TAACTGCCGC
GCCCTGACGG CCGCCGATCT CGGCAAGGCT TTTCCCGAAA GCGGTTTCGA GCTGATCGTT
GGCGACGTTT CCTTCATCTC CATGACCCTG GTTCTGCCGC AATTGCCTGC GTTACTCGCA
GAACACGGCG ACCTGCTGCT GCTCGTCAAG CCTCAGTTCG AAGTCGGCCC CGACAACATT
GGCAAGGGTG GGATTGTGCG TGACATAGCG CTTTACAAGG ACGTAGAGAC AAAGTTCCGA
ACCTGCGCCG CAAGCCTTGG CCTGAAAGTC CGCGCCTGGC TGGATAGTCC GATTACCGGC
GGTGATGGCA ACCGCGAATT CTTCATCTGG TTGAACAAAT GA
|
|---|
| Protein sequence | MSMNSFHARQ KKPRPTPQPA HERPAGVLRA DALLVAQKLA PSRTAAQWMI KSGRVSWAGG
AISKPALELP EDTPLTVTAD PEAHYVSRGG NKLAGALSET GLTVAGKVCL DVGQSTGGFT
DCLLQAGAKH VVGVDVGHGQ LHSQLRHDSA VTAIEGVNCR ALTAADLGKA FPESGFELIV
GDVSFISMTL VLPQLPALLA EHGDLLLLVK PQFEVGPDNI GKGGIVRDIA LYKDVETKFR
TCAASLGLKV RAWLDSPITG GDGNREFFIW LNK
|
|---|
| |