| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0074 |
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| Symbol | |
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| ID | 3569713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 88541 |
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| End bp | 92146 |
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| Gene Length | 3606 bp |
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| Protein Length | 1201 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637678509 |
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| Product | allophanate hydrolase subunit 2 |
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| Protein accession | YP_283303 |
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| Protein GI | 71905716 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1038] Pyruvate carboxylase
[COG1984] Allophanate hydrolase subunit 2
[COG2049] Allophanate hydrolase subunit 1
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain
[TIGR02712] urea carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.755435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGCA AAGTCCTTAT CGCCAATCGT GGCGCCATCG CCTGCCGGAT CATCCGTACC
CTGAAAAAGC TGGGGATTGC CTCGGTCGCG GTCTATTCCG AGGCTGATGC CAATTCCTTG
CATGTCACGC TGGCCGACGA GTCCGTATGT ATCGGCCCGG CTCCGGCCGC GGAGAGCTAC
CTGAAGGCTG AGCGGATTCT TGAGGCAGCG CAGCAGACCG GGGCTCAGGC GATCCACCCT
GGCTACGGCT TCCTGTCGGA GAACCCCGAT TTTTCGGATG CCTGCGAGGC TGCCGGCATC
GCTTTCATTG GCCCGACCAA GGCGCAGATG CTGGCTTTCG GCCTCAAGCA CACGGCACGC
GAACTGGCCG AGGCGGCTGG CGTTCCGCTG CTGCCGGGCA GCGGCCTGCT GAGCGATGTC
GGCCACGCCC GCGGCGAGGC GGCGCGCATT GGCTATCCGG TGATGCTGAA GAGTACGGCG
GGCGGCGGCG GGATCGGCAT GCGCCTGATC TGGGCCGAGG ATGAACTGGC CGAAGCCTTC
GCCTCGGTTG ACCGGCTGGC CCGGGCAAAT TTCAAGGAAG CCGGCATCTA TCTCGAAAAA
TATGTCGAAT CGGCGCGGCA CATCGAAGTG CAAGTGTTCG GCGACGGGGT GGGCAAGGTG
CTCGCCCTCG GCGAGCGGGA TTGTTCGGTG CAGCGCCGTA ACCAGAAGGT GATCGAGGAA
ACGCCGGCTC CCGGCCTGAA CGATGCCCAG CGCCAGGGTC TGGCCGAAAC GGCGGTACGC
CTGATGGCTT CGGTGTCCTA CCGCTCGGCC GGGACGGTCG AGTTCGTGAT GGATGCGGCG
ACCGGCGCCT TCTACTTCCT CGAGGTCAAT ACCCGCCTGC AGGTCGAACA CGGCGTGACC
GAAGAGGTGA CCGGCGTCGA TCTCGTTGCC TGGATGGTGC TGCTCGCGTC CGGTGACCTG
CGATTGCCGG CCACGGCACC GAGGCCGCGG GGTGCGTCGA TCCAGGTGCG CCTCTATGCC
GAAGATCCGA ACAAGAATTT CCAGCCTTCC TCCGGCCTGC TGACCGAGGT CACTTTTCCC
GAGGGCGTGC GGGTCGAGAC GGCGGTCAAG ACCGGCTCCG AGGTGCCGCC GTATTACGAC
CCGATGGTCG CCAAGCTGAT TGTTCATGCC GAAAGCCGCG AGGCTGCTGT CGACAAGCTG
GCGGCAGCGC TGGCCGCGAC GCGAGTCGCC GGCATCGAGA CCAATCGCGA GTACCTGCGC
CAGATTCTGG CCGGCAGTGT TTTCCGTGCC GGAGAACAGA CGACGCGCTA CCTCAATGCC
TTCCATTACC AGCCGGCGAG CATCGATGTT CTGGAGCCCG GCGTCCAGAC CTCGGTACAG
GACTGGCCGG GTCGAGTCGG CTACTGGGAT GTCGGCGTGC CGCCCTCAGG GCCGATGGAT
GACCTGGCCT TGCGGGCGGC CAACCGGCTG GTTGGGAATC CGGAGGGCAT GGCCGGTCTG
GAATGCACTA TGACCGGCCC GACGCTCAAG TTCAATTGCC CGGTGGTGAT TGCCCTGAGC
GGGGCCGAAA CTGCCGCGAC CCTCGATGGC GAGCCGCTGG CCTTCTGGCA GGCGCATGCC
GTCAAGGCCG GCAGTATCCT CAAGGTCGGC GCCATCCGCG ATGCCGGTTG CCGCAGTTAT
CTGGCGGTGG CGGGCGGTAT CGACGTTCCC GACTATCTGG GCAGCAAATC CACCTTTACG
CTAGGCCAGT TTGGCGGCCA CGGCGGACGC ACGCTGCGGC TGGGCGATGT GCTGCACATC
GAGGCGACAG AAACCTTGCC GATGGTCGAG CTGCCGGCCG AAATGGCGCC GGTCTATGAG
CATCATTGGG AAATCGGGGT GCTCTACGGC CCGCACGGGG CACCGGATTT CTTCACCGAT
GGCGATATCG GAACCTTCTT CGCGACTGAC TGGGAGGTGC ATTACAACTC CAGCCGCACC
GGCGTCCGGC TGATCGGTCC GAAACCGGCG TGGGCAAGGA CTGACGGCGG CGAGGCCGGG
CTGCATCCAT CGAACATTCA CGACAACGCC TACGCCATTG GTGCCATCGA TTTCACCGGC
GACATGCCGG TCATTCTCGG GCCGGATGGC CCCAGCCTCG GCGGCTTTGT CTGCCCGGCC
GTGGTGGTTC AGGCGGAATT GTGGAAGCTC GGCCAGCTGC GGCCGGGCGA TACGGTGCGT
TTCCTGCCGA TCAGTGCGGC CAGTGCTGCA TGTCGTCTGA GCGAAGTCGA TCAGGCCGTG
GCCAGCCTGG CTGCGCCTTT GACGACGCGC TTGCCAAGCG CCGTGGCGGA GCTCGGCACG
CCTGTCCTGG CCGAGTTGCC GGCGCTTGGC GACCGGCCGC GCGTGGTTTA CCGTCAGGCC
GGCGATGCCT ATCTGCTGGT TGAGTACGGT CCGCTGGTGC TCGACATCGA GTTGCGCTTC
CGGGTTCAGG CCCTGATGGA CTGGCTGAAG GCCAATCCGC AGCCGGGCAT CCTCGACCTG
ACACCTGGTA TCCGCTCGCT GCAGGTGCAT TTCGATGCCC GTCGTTGTGA TCGGGCTGTG
CTGCTTGCCA TGCTGCTGGC GGCAGAACAG GCGCTGCCGG CGGTGGACGA CATGGTCGTA
CCGAGCCGGA CGGTGTGGCT GCCCCTGTCC TGGGACGACC CGGCGACCAA GCTGGCGATC
GAAAAATACA TGCAGTCGGT GCGCAAGGAT GCGCCGTGGT GTCCCTCGAA CATCGAATTT
ATCCGCCGTA TCAATGGTCT CGAGTCGATC GAGCAGGTCT ATGCTACGGT CTTCGAGGCC
AGCTATCTGG TGCTCGGCCT TGGTGACGTT TACCTTGGTG CGCCGGTGGC GACGCCGGTC
GATCCCCGGC ATCGCCTGGT GACGACCAAG TACAACCCGG CCCGGACGTG GACGCCGGAA
AACGCCGTCG GCATCGGTGG CGCCTACATG TGCGTCTATG GCATGGAAGG GCCCGGCGGC
TACCAGTTCG TCGGCCGTAC GGTACAGATG TGGAATCGCT GGAACCATGG GGCGCGGGGT
ACGGCGCAGT TCGCCCAGCC CTGGCTGCTG CGCTTCTTCG ACCAGGTACG CTTCACGCCG
GTCAGCGAAC AGGAACTGGT GCGCTGGCGC CAGGACTTTC TGGCCGGCCG GGCCAGTGTT
CGCATCGAGG AAGGCAGCTT CCGGTTGTCC GACTACCGTC AATTCCTGAC CGATAACGCA
GCTTCCATCG GCGATTTCAA AGCCCGGCAG CAGGCGGCTT TCGAGGCCGA GCGTGAGCGC
TGGAAAGAGG CAGGGCAAGC GGAATACATC AGCGAGAGCG ACATTGCTGC CGCCGGCACC
GACAGCGAGC TCGACCTGCC TGAGGGCGCC AGCCTGGTGG TGAACCATGT TCCCGGCAAT
GTCTGGAAGA TCCTGGTGAC GCCCGGCCAG AGGGTCAAGG CGGGCGAACC GCTGGTCATT
GTCGAGTCGA TGAAGATGGA ATTCACTGTC CCCGCCCCGG AGGACGGTGA AGTCCTGCAA
CTGCTTTGCC AGGAGGCCAG CCCGGTTGCC GCCGGTCAGG ATCTGCTGGT TCTCAAGACC
ACCTGA
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| Protein sequence | MFSKVLIANR GAIACRIIRT LKKLGIASVA VYSEADANSL HVTLADESVC IGPAPAAESY
LKAERILEAA QQTGAQAIHP GYGFLSENPD FSDACEAAGI AFIGPTKAQM LAFGLKHTAR
ELAEAAGVPL LPGSGLLSDV GHARGEAARI GYPVMLKSTA GGGGIGMRLI WAEDELAEAF
ASVDRLARAN FKEAGIYLEK YVESARHIEV QVFGDGVGKV LALGERDCSV QRRNQKVIEE
TPAPGLNDAQ RQGLAETAVR LMASVSYRSA GTVEFVMDAA TGAFYFLEVN TRLQVEHGVT
EEVTGVDLVA WMVLLASGDL RLPATAPRPR GASIQVRLYA EDPNKNFQPS SGLLTEVTFP
EGVRVETAVK TGSEVPPYYD PMVAKLIVHA ESREAAVDKL AAALAATRVA GIETNREYLR
QILAGSVFRA GEQTTRYLNA FHYQPASIDV LEPGVQTSVQ DWPGRVGYWD VGVPPSGPMD
DLALRAANRL VGNPEGMAGL ECTMTGPTLK FNCPVVIALS GAETAATLDG EPLAFWQAHA
VKAGSILKVG AIRDAGCRSY LAVAGGIDVP DYLGSKSTFT LGQFGGHGGR TLRLGDVLHI
EATETLPMVE LPAEMAPVYE HHWEIGVLYG PHGAPDFFTD GDIGTFFATD WEVHYNSSRT
GVRLIGPKPA WARTDGGEAG LHPSNIHDNA YAIGAIDFTG DMPVILGPDG PSLGGFVCPA
VVVQAELWKL GQLRPGDTVR FLPISAASAA CRLSEVDQAV ASLAAPLTTR LPSAVAELGT
PVLAELPALG DRPRVVYRQA GDAYLLVEYG PLVLDIELRF RVQALMDWLK ANPQPGILDL
TPGIRSLQVH FDARRCDRAV LLAMLLAAEQ ALPAVDDMVV PSRTVWLPLS WDDPATKLAI
EKYMQSVRKD APWCPSNIEF IRRINGLESI EQVYATVFEA SYLVLGLGDV YLGAPVATPV
DPRHRLVTTK YNPARTWTPE NAVGIGGAYM CVYGMEGPGG YQFVGRTVQM WNRWNHGARG
TAQFAQPWLL RFFDQVRFTP VSEQELVRWR QDFLAGRASV RIEEGSFRLS DYRQFLTDNA
ASIGDFKARQ QAAFEAERER WKEAGQAEYI SESDIAAAGT DSELDLPEGA SLVVNHVPGN
VWKILVTPGQ RVKAGEPLVI VESMKMEFTV PAPEDGEVLQ LLCQEASPVA AGQDLLVLKT
T
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