| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_2115 |
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| Symbol | |
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| ID | 3516102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 2612530 |
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| End bp | 2615178 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637670830 |
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| Product | ABC efflux transporter, fused inner membrane subunits |
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| Protein accession | YP_265396 |
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| Protein GI | 71066669 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.675122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAATA AGAATGTAGA AGACATCTCA TCGACTGATA ATACTGATAC CACCATGGCT
AGAGAGTCAG ACGCTAGTGG CGGTATCGTA CGCCAGCTAT TGACGAGCAC CTTGGGTTTA
CAAGGATTGG GCGCGCAAGC ACTCAGCCGC AGCTGGTGGC AGCGCTGGAT ATATCCAGTA
TTATTCTTAT TAACCTTAAC CTTGTCACTT GCCACTTACC TCACGCTTGA TTCTATCCAG
CAGTCAGTTG ACACCTATAT CAATGACAAT CAGCGTGCTT TGGTCGGTGG CGATTTAATC
TTAAACAGTA AGCAAGATTG GCCAAGCGAA GTATTAACGC AGATTGATAC CCTTGCTGAT
ACACAAACGG TTTTTGACTA TCAGTTTAGC GCGATGGTCG TCACTGATGA GCAGACCTTA
CTTGCCAGCA TCAAGGCGGT TTCCCAATCC TACCCATTAT ATGGTGATGT CGAGCTGGCA
TCAGGACAGC CCTTATGGCA ACAGCTCACA GCAAATCATG TGGTCGTCGC TCCAGAAGTG
CTTAAAAGCT TAGATGCTGA TATTGGTGAC CAAATTACCA TAGGTGATGC GCAATTTATC
ATTAGTGATG TGCTGACAAA AGAGCCTGAT CGTCCGCTGA GCGCCTTTGG CTTTGGTGGG
CGTATTTTGA TGCCACAGCA GACGTTAGAG GCGACCAATC TATTGGGACA GCGTAGCCGT
ATTAATTACC GTATTGAGCT GGCAGGTAAT GCAGAATTGA TGGCAATCCA GCGCGATAAG
CTGACGCAAA TATTGACCAA TTATCCTGAT ATCGAGCTCT CTGATGCGGA ATCTGCGGAT
ACCTCGGTTT CGCGTATCTC TGACAATGTA CTGATGTTTT TAAAGCTTTT GGTCATTGCT
GTACTGTTAT TATCCGCAGT GGCTATGTAT GGCGTCATCA CGGCATTTGT GACCAAGCAG
CAGTCTAGCA ATGCGATACG TTTGGCACTG GGTGAGCCAC TTGGTTCCCT CAAACGCAGC
TACTATCAGC TGCTAATTAT TACCGCCATT ATTGCTTGTA TCGCAGCGAT TTTAGTCAGC
TTTGGCTTAC TCAAAGTCGG TCAGCCTTAT CTTGTGGCTA TCTTACCAGC TGACGTCAGC
TTGGCTATTA ACCCTATCAG TGCCATTAAA ACCATCATCA TAGCCTTGGT GCTGACGCTA
CTCATCGCCC AACGCGGCTT GAGCACATTG AACACCACCA AACCTGCTAC CTTGCTCAAT
CAAGGTGCAA GCTCAGCTGG GCAACAGCTA CCTTGGTATC AGCGTTTACC GTTACTTTGG
TATGGGTTAA TGCTGGCTGG TCTATATGTC TTTTTTGCTT ATGAAGTAGG CGGGTGGTTA
TTTGGCGCGC AATTATTAAT CGGTTTAATT GGCTTTGTGA GCGTATTTTG GCTATTGGCA
CGCGGCTGGC TGTGGTTACT GGCACGTATC GCAAGTAACG CTAAAATTGG CTGGATGCAG
CGTATTGCGA TTCATAACCT TGCACGTAAA GGCAACCAAT CGGCATTATT TTTTGTCACC
TTAGCACTAT CGGTGGCAGT ACTCACCCTC ATCACAACGC TCAATCACAG TATCAACGCC
CAGTTTATTA ACGCTTATCC TGAAGATGCG CCCAATTTAT TTTTGTTAGA CATTCAGAGC
GATCAGCATG ATGAGATTGA TACTATTATT GGCGCACCAG TGAGCTATTA CCCAGTCATC
CGTGCTCGAG TAGTGACTGC TAATAATATA CCGGTACAGG ATATCGAGCC TGCTGATGGC
TTTGATGATC CCGCACGTGT CTTTAATCTA AGCTATGCAG ATACGGTAAT GGACACTGAA
TTTATTACGG ATGCTGTAGC AGACAATCAG CTGTATGCGC CTATTGATAA TCAAAATGAG
CAAAACCAAG ACGTCGCACC CTTGTCTATT TTGGACACGG CCGCCAGCTT ACTGAATGTC
GGCATGGGTG ATGAAGTGCG TTTTAACATT CAAGGGATCG AAATCGTCGG GCAGATTACC
AGTATCCGCT CGCGTTATGA GCAAGGTCCC AGTCCTTATT TCTACTTTTT ATTTGAGCCA
GCCGTTCTCT CTGCTGCCCC GCAGATTCAA TTTGCCACCG CGCATGTAAA CGCTGATGAT
ATTCCAGACC TGCAAGGAAA AATGGTACGA CAATTCCCTG CAGTGACGAC GATAGACGGA
ACAGCAATCG CTCAGCAGGT CCAAGAGTTG GTGGTGCAAA TGAGCCGTTT GGTATACGTC
TTTACGCTAC TGGCCTTACT GACTGGTGTT ATGGTACTGA TTAGCTCGTT GTTATCCACC
TCACAAGACC GCTTGCAAGA AAGCGCCTCT TTTAGGCTGC TAGGGATGCA AAAACGCGAC
TTGTATATGC TAAATATTTT AGAGCTTGGG GTATTGGGAA TTAGTGCGGC GACCTTTGCG
ATCATTATCG CCAGCGTTGG CGCATGGGCT GCCCTCACTC AGTGGTTTAA TCTACGCTTT
AGTGTGCCGT GGGCAAGCCT GAGTATCGGT AGTATGGCGT TAATCGTTTT ATTATTTGCC
ATTGCCATTA TTTATGTGAG ATTGGTGATT GGGCGCGGCA TTATGGCAAG GGTAAGGGCG
ATGATTTAG
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| Protein sequence | MDNKNVEDIS STDNTDTTMA RESDASGGIV RQLLTSTLGL QGLGAQALSR SWWQRWIYPV
LFLLTLTLSL ATYLTLDSIQ QSVDTYINDN QRALVGGDLI LNSKQDWPSE VLTQIDTLAD
TQTVFDYQFS AMVVTDEQTL LASIKAVSQS YPLYGDVELA SGQPLWQQLT ANHVVVAPEV
LKSLDADIGD QITIGDAQFI ISDVLTKEPD RPLSAFGFGG RILMPQQTLE ATNLLGQRSR
INYRIELAGN AELMAIQRDK LTQILTNYPD IELSDAESAD TSVSRISDNV LMFLKLLVIA
VLLLSAVAMY GVITAFVTKQ QSSNAIRLAL GEPLGSLKRS YYQLLIITAI IACIAAILVS
FGLLKVGQPY LVAILPADVS LAINPISAIK TIIIALVLTL LIAQRGLSTL NTTKPATLLN
QGASSAGQQL PWYQRLPLLW YGLMLAGLYV FFAYEVGGWL FGAQLLIGLI GFVSVFWLLA
RGWLWLLARI ASNAKIGWMQ RIAIHNLARK GNQSALFFVT LALSVAVLTL ITTLNHSINA
QFINAYPEDA PNLFLLDIQS DQHDEIDTII GAPVSYYPVI RARVVTANNI PVQDIEPADG
FDDPARVFNL SYADTVMDTE FITDAVADNQ LYAPIDNQNE QNQDVAPLSI LDTAASLLNV
GMGDEVRFNI QGIEIVGQIT SIRSRYEQGP SPYFYFLFEP AVLSAAPQIQ FATAHVNADD
IPDLQGKMVR QFPAVTTIDG TAIAQQVQEL VVQMSRLVYV FTLLALLTGV MVLISSLLST
SQDRLQESAS FRLLGMQKRD LYMLNILELG VLGISAATFA IIIASVGAWA ALTQWFNLRF
SVPWASLSIG SMALIVLLFA IAIIYVRLVI GRGIMARVRA MI
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