Gene Psyc_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1872 
Symbol 
ID3515841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2303677 
End bp2304912 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content45% 
IMG OID637670569 
Producthypothetical protein 
Protein accessionYP_265154 
Protein GI71066427 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.949133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACCGA CTATTTGGCA ACGATTTACC GCACCGCTTA TTGAGCCTTA CGCACGCTAT 
CAGCATGCTG ACGTACTGCA TGCGATACGT TTGGGTAGCG CCGTTCTCAT TGCACTAGTG
GTGAATGAGT TTACGAACCT GCCACATGGT GAGTGGACAA CCATTACTGT GTTTGTGATA
TTGGGCTTGT TGCAGTATCA AGGGGCGATT TATACCAAGG CAAAAGAGCG GATTTTGGGT
ACCATACTCG GTGTAGGTGT CGGACTGAGT TTTTTATGGC TGATTCAAGA TATCGGTGGC
TGGTTGTGGT TGTATTATGC GCTGATTGGT ATTATTAGCG GCATCATCGG TTATGTGGCA
GTCAAGCAGT TGGGCTATAT AGGTCTGCTA ACGGGTATTA CGATGTTGAT GATTGTCTCA
AGCCCTGATC ACACCAATAT CGCCCAAGAT GGTCTCTATC GCGCCTTTAA TATCTTGCTT
GGTGCTGGCG TGGCAGTCGC GGCAACCTTG ATTTTACCGC TAAAATCCAC CTTGATGTGG
CGGTTTTTAT TGGCAAGCAA TCTTGAAACA TGCAGCAATC TGTATGCAGG GGTTGGAAAT
CATATTGATG CTGAGGTGTT GGTGCCTAAG CCGTTTAAAT TTAGCAAGGC TACTAGCTTA
TCAAGTTTGA CTTATCCTGC GAGCCGATCT GTACCTGATA CACCAGTTAA TAAATCTTTG
GTTAAAGCAT TACAAAAAAT TAATAAGCGC TTGTTAGCTG TACGCCCGCA TATCGCTGCG
ACTGCCAGCG AATCCGGAAT CGACAAAGAG ACGTTAGAGA CGATTCAGCG CACGCATCGT
AATATTATTG GTACTATTGA TTTATTATTA AGTGCTGCGC CGCGCTTGGC TAATATTGAA
ATTGACGATG AAAATCATAT CCTACTTATA CATTATCAAC ATGAATTGAC TCAAGCGATG
CAACATATGG CGGCGGTATT GCGTAGCCCA AATGACGAGG TTTTTCGTCC CATTACCCGA
ATCACGGTAT CAGAATATCC AAGTGTGGAA AATTTAGGCT TTGAGTGGCA AGGCTACTTT
TGGTTGACCC AAACCTTACA AGTACAGTTG CAGGGGCTCA GTGACTTACT ACAAGAGACT
AAGCTGCAAT GGTTTGCTGC TTCTGGTCTG CGCTACCAGC GCCGTGAACA ACGCCGAATT
GAACACAAAG GTAGCGAAAC CGATTTGCAT TTATAA
 
Protein sequence
MKPTIWQRFT APLIEPYARY QHADVLHAIR LGSAVLIALV VNEFTNLPHG EWTTITVFVI 
LGLLQYQGAI YTKAKERILG TILGVGVGLS FLWLIQDIGG WLWLYYALIG IISGIIGYVA
VKQLGYIGLL TGITMLMIVS SPDHTNIAQD GLYRAFNILL GAGVAVAATL ILPLKSTLMW
RFLLASNLET CSNLYAGVGN HIDAEVLVPK PFKFSKATSL SSLTYPASRS VPDTPVNKSL
VKALQKINKR LLAVRPHIAA TASESGIDKE TLETIQRTHR NIIGTIDLLL SAAPRLANIE
IDDENHILLI HYQHELTQAM QHMAAVLRSP NDEVFRPITR ITVSEYPSVE NLGFEWQGYF
WLTQTLQVQL QGLSDLLQET KLQWFAASGL RYQRREQRRI EHKGSETDLH L