Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1816 |
Symbol | pilI |
ID | 3515785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 2234982 |
End bp | 2235512 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637670513 |
Product | type IV pili signal transducer |
Protein accession | YP_265098 |
Protein GI | 71066371 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCATCGA GAGGATTTGT TGAGCTTCTG CGTATAGCAG ATATGGCACG TTCGCGTAAA AGTGGATCCC GCGGTGGACA AAAATTTGAC TGGCAAGGAA TAGTATTTGA GATTGGCGGT CAACGCTTGG TTGCGCCAAT GGGTCAAGTA GCAGAAGTAT TATCCATGCC AGAGTATACC AGCGTGCCCT TAGTAAAGCC TTGGATGCTT GGTATCGCCA ATATTCGCGG GCGTTTACTG CCGTTGACCG ATTTGTCTCG ATTTTTACAA GTGCCCAGTC GGTTATCGCA AATGAGCCAG TGCAAAGTCA TGGTCATCGA CCATAATAAT GTATTTTCAG GGTTGCTTGT TGATCAAGTG CTCGGTATCG AACAGTTTAC TCAAGACCAA TATCGTCCAG AAGCAATGGA GCCGAATTCG CCATTTGCGC CTTATAACCA TGGCAAGTTT TTCAAAGATG AACAAGATTG GTATGTGTTT ATGCCAAGCT TGCTGACACA GGATTTACAG TATACCGATG CTGCAATATA A
|
Protein sequence | MASRGFVELL RIADMARSRK SGSRGGQKFD WQGIVFEIGG QRLVAPMGQV AEVLSMPEYT SVPLVKPWML GIANIRGRLL PLTDLSRFLQ VPSRLSQMSQ CKVMVIDHNN VFSGLLVDQV LGIEQFTQDQ YRPEAMEPNS PFAPYNHGKF FKDEQDWYVF MPSLLTQDLQ YTDAAI
|
| |