Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1800 |
Symbol | |
ID | 3515769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 2210929 |
End bp | 2211597 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637670497 |
Product | hypothetical protein |
Protein accession | YP_265082 |
Protein GI | 71066355 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.404735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGTGC CACCTGAATA CCATAGCCCT TTATTGCAAA GTACGATGCA CTGTTTGTCA GAGGCAAGCA TTGAACTACA GGTGAGAAAA AAGCGCGTCA AAAATATCAA TTTTCGCTTA AAGCCTCATC TACTGATGGT ATCAGTTCCT ACATTTATTA GCCCTGCACA AATGGCAGAG TCTATTGCTA AGCGGGTGCC GTGGGCGATA CAAAATCATG CACAAGTTTT AGAGCAATAC CAACGTAAAC AAAGCACCTC GTCCGATTCT TCAGTTGCTG ACAGCCCTAT TTTATTGTGG GGCATATCGC AATCCTTCAG CTTAAGCGAT GATAAGAAAC TAGCTTACTA TCGACAAGAG CTTTCTAAAG TCATACCTTC TTTGTTTGAT AAGTGGCAAC CGATTGTCGG TGCTAGAGCC AATGAAATAC GCCTAAAAAA GATGCACACG CGTTGGGGCA GTTGTAATAC TCGCGCGCGC CGTATTTGGC TGTCTGTCTA TTTGCCTGCT TATCCGATTG AGTGCACCGA ATACGTCATC GTTCATGAGC TTTGTCATCT ACATCATCCT AATCACAGTG CCGCGTTCTG GCAGACGGTG GCGACAGCGA TGCCTGACTA TCAGTATTGG CATAATCTGC TGGCAGGTAA AGATGGTCAG CTCGATTGA
|
Protein sequence | MNVPPEYHSP LLQSTMHCLS EASIELQVRK KRVKNINFRL KPHLLMVSVP TFISPAQMAE SIAKRVPWAI QNHAQVLEQY QRKQSTSSDS SVADSPILLW GISQSFSLSD DKKLAYYRQE LSKVIPSLFD KWQPIVGARA NEIRLKKMHT RWGSCNTRAR RIWLSVYLPA YPIECTEYVI VHELCHLHHP NHSAAFWQTV ATAMPDYQYW HNLLAGKDGQ LD
|
| |