Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1798 |
Symbol | |
ID | 3515767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 2209091 |
End bp | 2209999 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637670495 |
Product | LysR family transcriptional regulator |
Protein accession | YP_265080 |
Protein GI | 71066353 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.270258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTACTT TACGTCAACT TGAGTTTGCC TTGGCGGTCG CTAAACACCG TCATTTTAAG CGCGCAGCAG AAGATTGTAA TATCTCACAG TCTGCATTGA GCCTCGGTAT CGCAGAGTTA GAAAAGCAGC TCGACACCCA GATTTTTGAG CGCAATAATA AGCAAGTATT AATCACCCCT ATTGGTGAAG ATATTTTAGT GCGGGCGCAA CGGGTATTTT CAGAAGTAAA TGATTTGACC ACGCGCGCGC ATAGCCATCA ATCGCCACTT GCTTACCCTA TGACCGTGGG TATCATTCCA ACGATTGCCC CTTATCTGCT ACCAAAAGTA TTGCCTGCGC TGCGTGAGCA CTATCCAGAA TTTCGCATGA CCATCGTCGA GCAACAAACC GAACGCTTAC TTGAACAAGT GCGTTACGGT CATATTGATA CCGCTATTAT TGCCCTACCT TATGCGGTAG ATGGCTTACA TAGTTTTGAG TTTTGGAGCG AAGACTTCTT TGCCGTCTTT CCAAAAAATG ATGTACATGC CAAGCTTGAT ACCATCAACG CTGATGAGCT GGCAACGGCA AACCTTATGT TACTTGGCGA AGGGCATTGC TTGACTGACC AAACGCTATC TGTCTGTCAT TTTGACCGTG CGCTGATGAA ATCCAGCTTT TCAGATGCCA GCTTAAACAC CCTTATTCAA ATGGCACTTG CCAATATGGG TACGACGTTG GTGCCAGAGA TGGCGCTCGA TCAATTGCAT TTGCAAAACC AAAACGCCGT TGCAGTACCA CTGGCAGAAA AAGGTCCGCA CCGTCATATT GCCTTTGTCA CCCGTCTGAA TTATGCCCGT GTCGATGATG TCAATTTGCT TGGCAAAGTG TTTAAGCAGG CGTTTGAAGA TAATGCTAAC AAAGACTAA
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Protein sequence | MITLRQLEFA LAVAKHRHFK RAAEDCNISQ SALSLGIAEL EKQLDTQIFE RNNKQVLITP IGEDILVRAQ RVFSEVNDLT TRAHSHQSPL AYPMTVGIIP TIAPYLLPKV LPALREHYPE FRMTIVEQQT ERLLEQVRYG HIDTAIIALP YAVDGLHSFE FWSEDFFAVF PKNDVHAKLD TINADELATA NLMLLGEGHC LTDQTLSVCH FDRALMKSSF SDASLNTLIQ MALANMGTTL VPEMALDQLH LQNQNAVAVP LAEKGPHRHI AFVTRLNYAR VDDVNLLGKV FKQAFEDNAN KD
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