Gene Psyc_1632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1632 
SymbolpyrC 
ID3515599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2017795 
End bp2018871 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content47% 
IMG OID637670327 
Productdihydroorotase 
Protein accessionYP_264914 
Protein GI71066187 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0418] Dihydroorotase 
TIGRFAM ID[TIGR00856] dihydroorotase, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000370433 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000720475 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGATT CAATTAGAGA ATTGACTATC CTGCAGCCCG ATGATTGGCA CATGCATTTG 
CGTGATGACA AGGCGCTAGC AACCACAGTC CCTCATGCGG CAGAGAGCTT TAATCGGGTT
ATCTGTATGC CAAACCTTGT GCCGCCGGTC AAAAACGTTG AAGATGCTCG CGCTTACCGT
GCGCGTATCA TGCAGCATCT AGAAGCCAGT AATGTGAGCG CTGAGCGTAA AGCAGCATTT
GATCCGCGTA TGACCTTGTA TCTTACCGAT CATACCACTG CACAAGATAT CGAGTTGGCA
GCACAATCTG GCATCGTGCA AGCGGTCAAG CTGTATCCTG CTGGCGCCAC CACCAACTCT
GCTGATGGCG TCACTGATAT CAATGCCTGC GTTGATGTAT TTGAAGCGCT TGAAAAATAT
AACCTTCCTC TATTACTGCA TGGCGAAGTC ACTCACGACC ACGTCGATAT TTTCGATCGT
GAAAAGCGCT TTTTGGATGA GGTGATGGTA CAAATCATCG CAAAGTTCCC AACTATGAAA
ATTGTGATGG AGCATATCAC CACCAGTGAT GCCGCTGATT TTGTCTTGTC ACAGGGCAAT
CAAATCGCTG CCACTATTAC GCCGCAACAT TTGATGTTTA ACCGCAATCA CCTGCTGCTC
GGTGGTATCA AGCCCCACTT TTACTGCTTG CCTATCTTAA AGCGTGAAAG CCATCAAAAA
GTATTATTAG ATGTCGCCAC CAGCGGCAAC CCAAAATTCT TTTTGGGCAC AGACTCCGCC
CCCCATGCAA CCGATAAAAA AGAAGCCGCT TGTGGCTGTG CGGGCTGCTA TAGCGCTGCT
ACAGCGCTAC CGTTATATGC CACAGCGTTT GATAGCGTTG GTAAAATTGA TAGATTAGAA
GGGTTTACTA GCCGTTTTGG TGCCCAATTC TACGGTTTGC CCGTTAACGA GAGCACTATT
ACGATTATCA ATACGCCGAT GCAAATCCCG GCATCTTACC CTTACTTTGA TGGCAGCTCT
CTAACACCAC TCATGGCAGG TGAGACCTTA CCTTGGTCGA TTAAAAAATC ACTTTAA
 
Protein sequence
MTDSIRELTI LQPDDWHMHL RDDKALATTV PHAAESFNRV ICMPNLVPPV KNVEDARAYR 
ARIMQHLEAS NVSAERKAAF DPRMTLYLTD HTTAQDIELA AQSGIVQAVK LYPAGATTNS
ADGVTDINAC VDVFEALEKY NLPLLLHGEV THDHVDIFDR EKRFLDEVMV QIIAKFPTMK
IVMEHITTSD AADFVLSQGN QIAATITPQH LMFNRNHLLL GGIKPHFYCL PILKRESHQK
VLLDVATSGN PKFFLGTDSA PHATDKKEAA CGCAGCYSAA TALPLYATAF DSVGKIDRLE
GFTSRFGAQF YGLPVNESTI TIINTPMQIP ASYPYFDGSS LTPLMAGETL PWSIKKSL