Gene Psyc_1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1623 
Symbol 
ID3515590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2005468 
End bp2006571 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content41% 
IMG OID637670318 
ProductPerM family permease 
Protein accessionYP_264905 
Protein GI71066178 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.134997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACC AGTCAATAGA CCCTTTTTTT CGACGCCTAT TTATTGTCGT TGCTATTGTT 
GTAGCTATGG TTTTATTGTA CTTAATGATG CCGGTCATTG TGCCGTTTGT CTTTGCTTTT
GTATTGGCTT ATTTGTTTAA TCCACTGGTC AAACGCCTAT CAAAATATAT TAAACGCTGG
ATTGCCATTA TTGTTGTGTA TTCGACGATT ACGCTGAGTA TGGTGATGCT ACTCTGGTGG
TTGATACCGA CATTGTGGCA TCAGCTGCAA GCAGCATGGG ATTATCTGCC ACAGCTTTTG
ACTTGGTACA ATGAAGTAGT ACGTGAATGG TTTGCTAGCA ATAGCCGTAT TCGTCTGCCA
GAGCTTGAGT CCAAAGGCTT CTCTGAGACC TTGGTTGAAT ACATGCAAAG CAATTATAAG
TTTGAAGATG CCAGTACCAT GATGAGCCAA ATATTGGCGT CTAGCATGAA CTTTATCAAT
AATGCAGGGC TCATTGTGTT GGTGCCGATT TTGACCTTTT ATTTCCTATT TAATTGGGAT
CAACGCTTAC ATACATGGAA AATGGCGATA CCCGCGCCAT ACTGTAAAAA AGTAATTCAA
ATTGCGCAAG AGTGTGACCG TGCGCTGATG GCTTTTATTA AAGGTCAGCT TTTAGTGATG
GTATTACTAG GTGCTATTTA TGCTGTACAA TTACAGCTTA TCGGGCTTGA GCTTGGGCTG
ATTATCGGTA TGGTTGCAGG TATTGCTAGC TTTGTCCCGT ATTTGGGCTT TGGTATTGGC
TTTGTCGCAG CGATTATCGC CTGTCTATTC CAGTTTGGCC TAGATTGGAC ATATTTATCC
TTGATTGTTG GCGCGTTTTT GATTGGACAA GCTGCCGAAG GCTATATCTT GCAGCCGCTA
TTATTGGGTG ACAAAATCGG TCTATCACCA TTATGGGTGA TATTTTCGGT GCTGGCAGGC
GCAAGTTTGT TAGGTTTCGT TGGTATGCTG ATTGCGCTGC CAGTGTCTGC TGTCCTTAAT
GTTTTATTCC GTCATTTTTA TGTTCATTAT CAAACGACTG ACTTTTATAA AGGTCGTAAG
CAATTGGCAT TATTTGAAAA ATAA
 
Protein sequence
MTNQSIDPFF RRLFIVVAIV VAMVLLYLMM PVIVPFVFAF VLAYLFNPLV KRLSKYIKRW 
IAIIVVYSTI TLSMVMLLWW LIPTLWHQLQ AAWDYLPQLL TWYNEVVREW FASNSRIRLP
ELESKGFSET LVEYMQSNYK FEDASTMMSQ ILASSMNFIN NAGLIVLVPI LTFYFLFNWD
QRLHTWKMAI PAPYCKKVIQ IAQECDRALM AFIKGQLLVM VLLGAIYAVQ LQLIGLELGL
IIGMVAGIAS FVPYLGFGIG FVAAIIACLF QFGLDWTYLS LIVGAFLIGQ AAEGYILQPL
LLGDKIGLSP LWVIFSVLAG ASLLGFVGML IALPVSAVLN VLFRHFYVHY QTTDFYKGRK
QLALFEK