Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1582 |
Symbol | |
ID | 3515547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 1937839 |
End bp | 1939161 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637670275 |
Product | MFS Ni2+ efflux pump NreB |
Protein accession | YP_264864 |
Protein GI | 71066137 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCAGTA TCTTTGCAAA CCGGACCTAT CGTCATTTAT TTGCCGCGCA AGTGATTGCC TTGATTGGCA CCGGTTTAGC TACTGTGGCG CTGGGACTAC TTGCTTTTGA TTTGGCAGGC AATAATGCTG GGGTCGTCAT GGGAACCGCA TTGGCCATCA AAATGATTGC CTATGTTGGC GTCGCACCAA TTGCAGCTGC CTTCGCCGAA CGGCTGCCCA AACGCACGAT GCTGGTAACG CTGGATGTGA TACGAGCGGG TGTGGCATTA CTTTTGCCGT TTGTTTCTCA AATTTGGGAA GTTTACGTAC TGATCTTTGT GTTGCAAGCC GCCTCAGCTG CCTTTACGCC TACTTTTCAA GCCACTATTC CTGATGTTCT GCCTGACGAG GCGGATTACA CCAAAGCTTT ATCGTTCTCA CGCCTTGCGT ACGATATGGA AAGTCTAGTC AGTCCTATGT TAGCGGCAGC ATTGCTGACA GTAATGAGCT TTCACAATCT GTTTACGGGG ACGGTGCTGG GATTTTTAGC GTCTGCCATA TTGGTCGTAT CAGTCACGCT ACCAGCGCAT GATATGCCAG AGCGCCGTAG CATTTACGAT CGAACCACAC GCGGCATTCG AATCTATTTG GCCACCCCTC GACTGCGTGG ATTACTCGCT GTCAATGTTG CCGTTTCTGC CGCAGCGTCT ATGGTTTTTG TGAATACAGT GGTGATCATT CAGGGTGGCA TGGGACTGAC TCAGAGCGCA GTCGCATTAG CATTGGCTAG TTTTGGCGCA GGATCTATGA TTGCTGCATT GGCTTTACCA AGCTTATTGG ATAAGCTGAC AGACCGTACG GTCATGTTAA GTGGTGTTGG GTTGCTGGTG ATAGGTATGT TCGCTGGTAC ATTGATGATG GGACAAAATT CGCTCATGGC CTTATGGTTC GTACTAGGTT TGGGTTATTC TGCTGCTCAA ACACCTTCTG GACGTTTGCT GTGGCGATCC TCACATCAGG AAGATCGTCC TGCATTGTTT GCCGCTCAGT TTGCTTTGTC CCATGTCAGT TGGTTGGTAT TTTATCCCTT GGCTGGTTGG TTAGGTGCTC GCTACAGTAT GACTCTAGCT TTTGCGGTAT TAGGCTGTGC TGCTGCACTA GCGGTGTGGG CGGCTTTTAG AGTCTGGCCG TCTATCGACT TAAAAGAGAT TGAACACGAG CATGTCAATT TGCCAGAGGG TCATATCCAT GCTACTGGAT CTCCTACACC CAACGGGATA CGCCATACAC ACCCTTTTGT AGTCGATGAC TATCATCCTC GTTGGCCAAA ATCAGGTCGT TGA
|
Protein sequence | MLSIFANRTY RHLFAAQVIA LIGTGLATVA LGLLAFDLAG NNAGVVMGTA LAIKMIAYVG VAPIAAAFAE RLPKRTMLVT LDVIRAGVAL LLPFVSQIWE VYVLIFVLQA ASAAFTPTFQ ATIPDVLPDE ADYTKALSFS RLAYDMESLV SPMLAAALLT VMSFHNLFTG TVLGFLASAI LVVSVTLPAH DMPERRSIYD RTTRGIRIYL ATPRLRGLLA VNVAVSAAAS MVFVNTVVII QGGMGLTQSA VALALASFGA GSMIAALALP SLLDKLTDRT VMLSGVGLLV IGMFAGTLMM GQNSLMALWF VLGLGYSAAQ TPSGRLLWRS SHQEDRPALF AAQFALSHVS WLVFYPLAGW LGARYSMTLA FAVLGCAAAL AVWAAFRVWP SIDLKEIEHE HVNLPEGHIH ATGSPTPNGI RHTHPFVVDD YHPRWPKSGR
|
| |