Gene Psyc_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1582 
Symbol 
ID3515547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1937839 
End bp1939161 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content49% 
IMG OID637670275 
ProductMFS Ni2+ efflux pump NreB 
Protein accessionYP_264864 
Protein GI71066137 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGTA TCTTTGCAAA CCGGACCTAT CGTCATTTAT TTGCCGCGCA AGTGATTGCC 
TTGATTGGCA CCGGTTTAGC TACTGTGGCG CTGGGACTAC TTGCTTTTGA TTTGGCAGGC
AATAATGCTG GGGTCGTCAT GGGAACCGCA TTGGCCATCA AAATGATTGC CTATGTTGGC
GTCGCACCAA TTGCAGCTGC CTTCGCCGAA CGGCTGCCCA AACGCACGAT GCTGGTAACG
CTGGATGTGA TACGAGCGGG TGTGGCATTA CTTTTGCCGT TTGTTTCTCA AATTTGGGAA
GTTTACGTAC TGATCTTTGT GTTGCAAGCC GCCTCAGCTG CCTTTACGCC TACTTTTCAA
GCCACTATTC CTGATGTTCT GCCTGACGAG GCGGATTACA CCAAAGCTTT ATCGTTCTCA
CGCCTTGCGT ACGATATGGA AAGTCTAGTC AGTCCTATGT TAGCGGCAGC ATTGCTGACA
GTAATGAGCT TTCACAATCT GTTTACGGGG ACGGTGCTGG GATTTTTAGC GTCTGCCATA
TTGGTCGTAT CAGTCACGCT ACCAGCGCAT GATATGCCAG AGCGCCGTAG CATTTACGAT
CGAACCACAC GCGGCATTCG AATCTATTTG GCCACCCCTC GACTGCGTGG ATTACTCGCT
GTCAATGTTG CCGTTTCTGC CGCAGCGTCT ATGGTTTTTG TGAATACAGT GGTGATCATT
CAGGGTGGCA TGGGACTGAC TCAGAGCGCA GTCGCATTAG CATTGGCTAG TTTTGGCGCA
GGATCTATGA TTGCTGCATT GGCTTTACCA AGCTTATTGG ATAAGCTGAC AGACCGTACG
GTCATGTTAA GTGGTGTTGG GTTGCTGGTG ATAGGTATGT TCGCTGGTAC ATTGATGATG
GGACAAAATT CGCTCATGGC CTTATGGTTC GTACTAGGTT TGGGTTATTC TGCTGCTCAA
ACACCTTCTG GACGTTTGCT GTGGCGATCC TCACATCAGG AAGATCGTCC TGCATTGTTT
GCCGCTCAGT TTGCTTTGTC CCATGTCAGT TGGTTGGTAT TTTATCCCTT GGCTGGTTGG
TTAGGTGCTC GCTACAGTAT GACTCTAGCT TTTGCGGTAT TAGGCTGTGC TGCTGCACTA
GCGGTGTGGG CGGCTTTTAG AGTCTGGCCG TCTATCGACT TAAAAGAGAT TGAACACGAG
CATGTCAATT TGCCAGAGGG TCATATCCAT GCTACTGGAT CTCCTACACC CAACGGGATA
CGCCATACAC ACCCTTTTGT AGTCGATGAC TATCATCCTC GTTGGCCAAA ATCAGGTCGT
TGA
 
Protein sequence
MLSIFANRTY RHLFAAQVIA LIGTGLATVA LGLLAFDLAG NNAGVVMGTA LAIKMIAYVG 
VAPIAAAFAE RLPKRTMLVT LDVIRAGVAL LLPFVSQIWE VYVLIFVLQA ASAAFTPTFQ
ATIPDVLPDE ADYTKALSFS RLAYDMESLV SPMLAAALLT VMSFHNLFTG TVLGFLASAI
LVVSVTLPAH DMPERRSIYD RTTRGIRIYL ATPRLRGLLA VNVAVSAAAS MVFVNTVVII
QGGMGLTQSA VALALASFGA GSMIAALALP SLLDKLTDRT VMLSGVGLLV IGMFAGTLMM
GQNSLMALWF VLGLGYSAAQ TPSGRLLWRS SHQEDRPALF AAQFALSHVS WLVFYPLAGW
LGARYSMTLA FAVLGCAAAL AVWAAFRVWP SIDLKEIEHE HVNLPEGHIH ATGSPTPNGI
RHTHPFVVDD YHPRWPKSGR