Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1550 |
Symbol | |
ID | 3515512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 1898998 |
End bp | 1900293 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637670240 |
Product | hypothetical protein |
Protein accession | YP_264832 |
Protein GI | 71066105 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.246601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.532937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCAC CGCCCTTAAC GCCCCTTGAT TATATTGCAG CAGGCTATTG GCAAGATTTC TTGGTAAGGC GTGCTGTCGC AGGCGGTATC GCTTACGAAG TAGATTTGCA TCACTGTAGT TTGGATGAAT CGCTGGCAAG CTTGCAGCGT ATAGACACCC TGCTGTCTCA GATACGCCGT GATATGGTTA AAGCAGGCAT TTGGGATGAA GCAACGTTAT TAAAAGACGA GCGCTATCGT AATTTTATGG TGTTTTTGGC TTTTTATGCT GGCAGAGTGT TGGCGCGGCA ATGGCGGCAA TCGCCGCGAT GGTTTGGTCG GTTTGAGCTA GATGCGCGCT ATCCTGAATT GGCACTGACA ACTGATGATT TTTATCAGCA TATGGCGATG CTTTATGGCA CTGATACTGA TATTTATACC AAAAATAGCA GTAATAGAGA TAATACTCCC CTTTTCTTTG CTTTAGAACC GATAGGGATG CGTCTATTTG GTCATATCGA CCGAGCGTTT AAATCGGCGC AAGGTTCCCA AGTCGATAGT GGCTTATATC AAGCCGTTAG TGCCAGATTG CCAAAAGCTA TAGCAGGTCA GGTAGTAGTA ACAGATAAAT CAGTCACTGA AGTAGCAGCT ATAGAAATAG TAAAGACCAC GCCTGTAGCA AAGACAGTAG CAGAAAAACC GCCAACGCCA GAGATGTTTA GCCAACTGTT GATAGAACTA AATGAGATAG AAGTAACACA GGCCACTAGC AAGACTGAAT ATGAGCAGGA ATGCAAAGTT TTAGACCAGT TTGAGCGTCA TATTGCAAAG CAACAAAAGC CACGTGAGCA AGTTATGTTT TCAGAGGCGC ATCGACAAGC AAAACAGCAA GCACTGCTAG GATTAAAAAA AGCGGCAGAT GCAGGCAATA GCGCTGCGAT GCTGCGCTTG GCAATGTATG AGCTGCTTGG CGAAGGTTTG ATAGCAAATG AAGGCGCAGA TAAGGTCGTT GGCATAGAAG CGGGGGTTGA ATGGGTCCAA CAAGCGGCGA GTAAAAATGA CAGTCGTGCC CAGCGCTTAC TGAGTAAAAT GTATTATCAA GGCGTAGGGG TGACGCAAGA CCTTAAGATT GGCAAATATT GGCTCGAACA AGCGGCAGAA AACGGGCACA TAGAAGCGGC AAGCTTGGTC GGTCAGTGGC AACAAGCGCA AGCGTTAATC ACCACACAAA AGCAAGAGCA GCATAGTCTT AAGCGCTATC AGCTACTGTT TGCAGTGATT ATTGTTATAG CCTTACTCAT TATTATTCTG GTCTAA
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Protein sequence | MSAPPLTPLD YIAAGYWQDF LVRRAVAGGI AYEVDLHHCS LDESLASLQR IDTLLSQIRR DMVKAGIWDE ATLLKDERYR NFMVFLAFYA GRVLARQWRQ SPRWFGRFEL DARYPELALT TDDFYQHMAM LYGTDTDIYT KNSSNRDNTP LFFALEPIGM RLFGHIDRAF KSAQGSQVDS GLYQAVSARL PKAIAGQVVV TDKSVTEVAA IEIVKTTPVA KTVAEKPPTP EMFSQLLIEL NEIEVTQATS KTEYEQECKV LDQFERHIAK QQKPREQVMF SEAHRQAKQQ ALLGLKKAAD AGNSAAMLRL AMYELLGEGL IANEGADKVV GIEAGVEWVQ QAASKNDSRA QRLLSKMYYQ GVGVTQDLKI GKYWLEQAAE NGHIEAASLV GQWQQAQALI TTQKQEQHSL KRYQLLFAVI IVIALLIIIL V
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