Gene Psyc_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1550 
Symbol 
ID3515512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1898998 
End bp1900293 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content46% 
IMG OID637670240 
Producthypothetical protein 
Protein accessionYP_264832 
Protein GI71066105 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.246601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.532937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCAC CGCCCTTAAC GCCCCTTGAT TATATTGCAG CAGGCTATTG GCAAGATTTC 
TTGGTAAGGC GTGCTGTCGC AGGCGGTATC GCTTACGAAG TAGATTTGCA TCACTGTAGT
TTGGATGAAT CGCTGGCAAG CTTGCAGCGT ATAGACACCC TGCTGTCTCA GATACGCCGT
GATATGGTTA AAGCAGGCAT TTGGGATGAA GCAACGTTAT TAAAAGACGA GCGCTATCGT
AATTTTATGG TGTTTTTGGC TTTTTATGCT GGCAGAGTGT TGGCGCGGCA ATGGCGGCAA
TCGCCGCGAT GGTTTGGTCG GTTTGAGCTA GATGCGCGCT ATCCTGAATT GGCACTGACA
ACTGATGATT TTTATCAGCA TATGGCGATG CTTTATGGCA CTGATACTGA TATTTATACC
AAAAATAGCA GTAATAGAGA TAATACTCCC CTTTTCTTTG CTTTAGAACC GATAGGGATG
CGTCTATTTG GTCATATCGA CCGAGCGTTT AAATCGGCGC AAGGTTCCCA AGTCGATAGT
GGCTTATATC AAGCCGTTAG TGCCAGATTG CCAAAAGCTA TAGCAGGTCA GGTAGTAGTA
ACAGATAAAT CAGTCACTGA AGTAGCAGCT ATAGAAATAG TAAAGACCAC GCCTGTAGCA
AAGACAGTAG CAGAAAAACC GCCAACGCCA GAGATGTTTA GCCAACTGTT GATAGAACTA
AATGAGATAG AAGTAACACA GGCCACTAGC AAGACTGAAT ATGAGCAGGA ATGCAAAGTT
TTAGACCAGT TTGAGCGTCA TATTGCAAAG CAACAAAAGC CACGTGAGCA AGTTATGTTT
TCAGAGGCGC ATCGACAAGC AAAACAGCAA GCACTGCTAG GATTAAAAAA AGCGGCAGAT
GCAGGCAATA GCGCTGCGAT GCTGCGCTTG GCAATGTATG AGCTGCTTGG CGAAGGTTTG
ATAGCAAATG AAGGCGCAGA TAAGGTCGTT GGCATAGAAG CGGGGGTTGA ATGGGTCCAA
CAAGCGGCGA GTAAAAATGA CAGTCGTGCC CAGCGCTTAC TGAGTAAAAT GTATTATCAA
GGCGTAGGGG TGACGCAAGA CCTTAAGATT GGCAAATATT GGCTCGAACA AGCGGCAGAA
AACGGGCACA TAGAAGCGGC AAGCTTGGTC GGTCAGTGGC AACAAGCGCA AGCGTTAATC
ACCACACAAA AGCAAGAGCA GCATAGTCTT AAGCGCTATC AGCTACTGTT TGCAGTGATT
ATTGTTATAG CCTTACTCAT TATTATTCTG GTCTAA
 
Protein sequence
MSAPPLTPLD YIAAGYWQDF LVRRAVAGGI AYEVDLHHCS LDESLASLQR IDTLLSQIRR 
DMVKAGIWDE ATLLKDERYR NFMVFLAFYA GRVLARQWRQ SPRWFGRFEL DARYPELALT
TDDFYQHMAM LYGTDTDIYT KNSSNRDNTP LFFALEPIGM RLFGHIDRAF KSAQGSQVDS
GLYQAVSARL PKAIAGQVVV TDKSVTEVAA IEIVKTTPVA KTVAEKPPTP EMFSQLLIEL
NEIEVTQATS KTEYEQECKV LDQFERHIAK QQKPREQVMF SEAHRQAKQQ ALLGLKKAAD
AGNSAAMLRL AMYELLGEGL IANEGADKVV GIEAGVEWVQ QAASKNDSRA QRLLSKMYYQ
GVGVTQDLKI GKYWLEQAAE NGHIEAASLV GQWQQAQALI TTQKQEQHSL KRYQLLFAVI
IVIALLIIIL V