| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1533 |
|---|
| Symbol | uppS |
|---|
| ID | 3515494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 1875645 |
|---|
| End bp | 1876403 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637670222 |
|---|
| Product | undecaprenyl pyrophosphate synthetase |
|---|
| Protein accession | YP_264815 |
|---|
| Protein GI | 71066088 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.554505 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0200658 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATGT TAGATAATTT AGCTCCAGCC CTTCTTCCAC GCCATATCGC TGTCATCATG
GACGGCAATA ACCGTTATGG CAAAGTCCAT AATTTAGGCA AAGGTCAAGG ACATATCGCT
GGCAAAGATG CGCTAGACCC TATTGTTGAG TATTGCGTCA GTACGGGTAT TGAAGTTTTG
ACGGTATTTG CTTTTTCAAG TGAGAATTGG CAGCGTCCAC CAAGCGAGGT GGCATTGCTG
ATGCATTTAC TGCGCTTAAC CATCAGTGAG CAAATGCCTC GTATGCTGAA ATATCGCATT
CGTCTGCGTT TTATCGGCGA CCGCAGTCAG CTTAGTGATG ATTTGCAAAT ATTGATGGCA
GATGCTGAAG CAAAAACGGC TAATTTTGAT GCCATGACAT TGGTCATCGC CATCAGTTAC
GGTGGACAGT GGGATATCGC TCATGCAGCA AAACAGCTGG TACAGCAAGT ACAGGCAGGT
CATTTAGCAA TTGAGGATAT TGATAAAGAA AAGCTTGGAG AGTATGTGCA ATTGGCGGAT
GCGCCAGAAG TAGACATGCT GATACGTACC GGCGGTGAGT ACCGTCTCTC GAATTTTTTA
TTGTGGCAAT CCGCCTATGC AGAGCTATTT TTTACCCCAA CATTGTGGCC GGATTTTAGA
GTCGATGAGC TAGCAGCAAT GCTAGAAGAT TTTGCCCAAC GTCAACGCCG CTTTGGTAAA
ACCAGTGAAC AAGTAGTGAC GACGCAAAAA ATATCTTAA
|
|---|
| Protein sequence | MSMLDNLAPA LLPRHIAVIM DGNNRYGKVH NLGKGQGHIA GKDALDPIVE YCVSTGIEVL
TVFAFSSENW QRPPSEVALL MHLLRLTISE QMPRMLKYRI RLRFIGDRSQ LSDDLQILMA
DAEAKTANFD AMTLVIAISY GGQWDIAHAA KQLVQQVQAG HLAIEDIDKE KLGEYVQLAD
APEVDMLIRT GGEYRLSNFL LWQSAYAELF FTPTLWPDFR VDELAAMLED FAQRQRRFGK
TSEQVVTTQK IS
|
|---|
| |