Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1510 |
Symbol | |
ID | 3515471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 1837804 |
End bp | 1840941 |
Gene Length | 3138 bp |
Protein Length | 1045 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637670199 |
Product | hypothetical protein |
Protein accession | YP_264792 |
Protein GI | 71066065 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0729] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACC AGCCTTCAAC GCCAGCGCAC AATTTAGCAA TGATGTCGCC TGACACTTCA GACCACCAAA ATGACTCAAT AAAATCTAGC GCTGCTATTA ATACTAATGA TACTCCGCGT CTTTATTTTA CCCGCACAGC GCTTTTTAGT GCATTGACCA CAAGCTTAGT CGGCTTTGGC TGTAGTCTTG CCCCTGCCGC TTTTGCTGCT ACTACTGATT TAAATAACAG CGCTACAAAC AGCCAAATAC TGGTAAAGAT TGCTACAGCA GCGTTGCCAA AAACCTCCAA AGCGGCTATT TCTGATGATG CGCAAGCTTC TGATACAAAC CAAAATTTAG AGCAGCAAGC CGCAGCGATA CAGCAGCAGG GTTATCAGAT GATGACGCCT GAAGAGATTG ATCGTGAGCT TGCGGCGATG GACAGGCAAA ACGCACAATA TATGGATAGA ATTGGCACTA GTAATAATAG TGGCTTTGCT GCGCCCGTAG CTACTTTAGA CGATCGCACG CCGCCGCTTG GGCTGGATGT GGAGTTGGAT GCGACCAATC TGCCGACACC AAGCAATTTA GACACATTAG GCATTAATGA AACCGCAGAG ATTATGGCGC GTCCTATTAC TGTTAGCGAT GCTGTCAGTA GCGGTAATGC CAGTGAGATG ATTGATAACG ACATTTTAGT CAACGTCAAT CAAGCAAAAA ATACAGAAAA TTCGATCAAT CCTGATGACT ATTTTCCAGG TTATGAAAAT GATACTGAGG CGGTTAGCGC AAGTATCGAG CAAGCCAAAA CGCCAAGCCC GATGGCGCGT AATAAAGGCA ATATCGTCAA GCGTCTCTAT AATCGGTTGT TTAATGCAGG CTCACTTGCG CTACCATATG TAGACACCAC GATTTATTTG CAACAAGCAG CGGCTGACAG TACCAATAAT AAGGCTGCCA AGCCCATACT AATCAAAGCA GATGATGATG TGCAGCCCAT TAAGAACATC AAGGCGGCGC TTGATGACAC CACCGTGCAA TCCGTTGTTG ACTTTACAGC AGCACTACCA CGCTTACGCC AAACCGCATT AGATGCGGCA AAAGCGGTTG GTTACTATGA CGTGACTTTG CGTTTACGCC AGCCTTATAC AGACACGATT GATGTCATCA TTGAAAAGCT GGGTGAGCCA GTACGCGTCG ATAGTCGAAT TGTCGATATT CGCGGTGCAG GCAGTGAGCA AAAAGAATTT GCTGCGTTAG AAAAAGATTT GCCACCAAAA GAGGGTGATA TTTTTAACCA CCGCGTCTAT AAAGACAGTA AATCTGCCCT TGAGTCGCTC AGTAATACTT ACGGTTACTT TGATCAAGAT TGGTTAAATA AATCTGTCGA TATTATCTTA CCTGACAACA CAGCGGATGT TTCGCTGGTT TACAATACCG GCAATCGTTA CGAGTTTGAT GAAGTGGTGT TTTTTACTTA TGATGAAGAC TCGGGAACAC TGACACGTGA CCCTGAAAAA CTGCCAGTTG AATTGTCATT GTTAAGACAG TTATTCGACT TTAAGGAGGG CGACCCTTTT TATCGTCCTG CGGTGACCAA ATTCAGTAAT GATTTATCGG CGACCCGTTA TTTTAATACC ATCAACGTTG AGTCGATTTT GCCGCCAGAT GAGCGCACGC AAAATGCTAC CTTAGCCTTT GATAACTCAC CAAATGCTGA CAATACTATT GAAACGACAG ATGACGAAGT GAACAATGCT ACTGATGTTA ATGCTCGCCA AATAGAGGGT GTTGGCAATG ACGGCGAGCT TTATACCAAT AGCGGGGAAA AAGTGAATGC TGCCGATATT ACTGCTATTG AATTTGAAGC CGATGAAGAG ACGCTTGAGA AGCTACAGGC GATTAAGCAA AAAGCAGAAC GCTTAAGCCG TCTGCCAAAT GATCGTGTAT TGGATGAAAA AGGCCAAGAT TCAAACAGTA TTTTAGGCAA AATAAGTGAT GCTATCAGTG ACGTTGCACA AAAGATATTC CCTGATGAGA AAAGCATACT GGCGGATGAG AACTTCGTGC CACCGACATT GGTAGGGCGT AAAACACCGC AAGAAGTGTT AGAGAGCAAG AAAGTACCAC TGTACGTGTT TGTGGCGGCG AATAAACCGC GCGATGCTCA GGTGGGTATT GGTTATGGTA CGGATACGGG TGTCCGTGCA ACCGCGAAAA TAGATTATAA TTTGCTCAAT CGTAAAGGCT ATCAGGCAGG GCTTGAGACA GAAGTTTCGA GAATTACTAA AAATGTCGGT GTCTATGCTA GCCGGCCATG GAAACACCCT TTGAATGACA AGCTTGAAGC AAGTTTGATT TATGAAGAAG AGGCGATTAA TCAAGGTGAA GGCAATTTCG ATTTGTCTAC CAAAACCCTA AAAGGGTCGC TAGCGCGTAA TATCCGCCGT GAAAGTGGTT GGAATCGCAG TTACTCTCTG CGTTACCGTT TAGATGAGTT AGAAACGGGT ATTGATGATG AAGCGCAGTT AAACAACCTT CCTATTCGCT TTACGTCCTC AAAGCCTAGA CAGCAAGCAT TATTACTTGG TTATGGCGTT AGTAAAACAG ATGTGGACAG TGCGACTAAT CCTACTAGCG GTATCCGCCA ATATTATTCG ATTGAAGCGG GTGCTGACAA AGCGCTTAGT GATACCAATC TGGCAATCGC TCGCGCTGGC GTCAGCGGTA TTTATAGCTT TGGTGCCGAT GATAAGCATC AAGTGCTTGG CAGTATCAAT ACCGGTTATA TTTGGGCAGA TGACTTTGAT GAGGTACCTT ATAAACTGCG CTTCTTTGCT GGTGGTGACC AAAGTATCCG TGGTTATGAC TACGAAAGCT TATCACCACT AGATAAAGGC TATCTGACTG GTGGGCAAAT CCTCGCGGTC GGTAGTGCAG AGTATAACTA TGAGTTTAAA CCCGGCTTTC GCGGTGCCGT TTTCACTGAC ATTGGTAATG CTTATGACAA AGATTTTGAC ACAGATACTA AAGTCGGCGT CGGCGTTGGT ATTCGCTGGG CATCGCCCGT TGGCGTGGTG CGCGTCGATG TCGCCGCTGG CGTGACAGAA GAGAGTATTC CAGTCAGGTT ACATCTGTTT ATTGGCTCTC CTTTATAA
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Protein sequence | MKHQPSTPAH NLAMMSPDTS DHQNDSIKSS AAINTNDTPR LYFTRTALFS ALTTSLVGFG CSLAPAAFAA TTDLNNSATN SQILVKIATA ALPKTSKAAI SDDAQASDTN QNLEQQAAAI QQQGYQMMTP EEIDRELAAM DRQNAQYMDR IGTSNNSGFA APVATLDDRT PPLGLDVELD ATNLPTPSNL DTLGINETAE IMARPITVSD AVSSGNASEM IDNDILVNVN QAKNTENSIN PDDYFPGYEN DTEAVSASIE QAKTPSPMAR NKGNIVKRLY NRLFNAGSLA LPYVDTTIYL QQAAADSTNN KAAKPILIKA DDDVQPIKNI KAALDDTTVQ SVVDFTAALP RLRQTALDAA KAVGYYDVTL RLRQPYTDTI DVIIEKLGEP VRVDSRIVDI RGAGSEQKEF AALEKDLPPK EGDIFNHRVY KDSKSALESL SNTYGYFDQD WLNKSVDIIL PDNTADVSLV YNTGNRYEFD EVVFFTYDED SGTLTRDPEK LPVELSLLRQ LFDFKEGDPF YRPAVTKFSN DLSATRYFNT INVESILPPD ERTQNATLAF DNSPNADNTI ETTDDEVNNA TDVNARQIEG VGNDGELYTN SGEKVNAADI TAIEFEADEE TLEKLQAIKQ KAERLSRLPN DRVLDEKGQD SNSILGKISD AISDVAQKIF PDEKSILADE NFVPPTLVGR KTPQEVLESK KVPLYVFVAA NKPRDAQVGI GYGTDTGVRA TAKIDYNLLN RKGYQAGLET EVSRITKNVG VYASRPWKHP LNDKLEASLI YEEEAINQGE GNFDLSTKTL KGSLARNIRR ESGWNRSYSL RYRLDELETG IDDEAQLNNL PIRFTSSKPR QQALLLGYGV SKTDVDSATN PTSGIRQYYS IEAGADKALS DTNLAIARAG VSGIYSFGAD DKHQVLGSIN TGYIWADDFD EVPYKLRFFA GGDQSIRGYD YESLSPLDKG YLTGGQILAV GSAEYNYEFK PGFRGAVFTD IGNAYDKDFD TDTKVGVGVG IRWASPVGVV RVDVAAGVTE ESIPVRLHLF IGSPL
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