Gene Psyc_1510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1510 
Symbol 
ID3515471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1837804 
End bp1840941 
Gene Length3138 bp 
Protein Length1045 aa 
Translation table11 
GC content45% 
IMG OID637670199 
Producthypothetical protein 
Protein accessionYP_264792 
Protein GI71066065 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0729] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACC AGCCTTCAAC GCCAGCGCAC AATTTAGCAA TGATGTCGCC TGACACTTCA 
GACCACCAAA ATGACTCAAT AAAATCTAGC GCTGCTATTA ATACTAATGA TACTCCGCGT
CTTTATTTTA CCCGCACAGC GCTTTTTAGT GCATTGACCA CAAGCTTAGT CGGCTTTGGC
TGTAGTCTTG CCCCTGCCGC TTTTGCTGCT ACTACTGATT TAAATAACAG CGCTACAAAC
AGCCAAATAC TGGTAAAGAT TGCTACAGCA GCGTTGCCAA AAACCTCCAA AGCGGCTATT
TCTGATGATG CGCAAGCTTC TGATACAAAC CAAAATTTAG AGCAGCAAGC CGCAGCGATA
CAGCAGCAGG GTTATCAGAT GATGACGCCT GAAGAGATTG ATCGTGAGCT TGCGGCGATG
GACAGGCAAA ACGCACAATA TATGGATAGA ATTGGCACTA GTAATAATAG TGGCTTTGCT
GCGCCCGTAG CTACTTTAGA CGATCGCACG CCGCCGCTTG GGCTGGATGT GGAGTTGGAT
GCGACCAATC TGCCGACACC AAGCAATTTA GACACATTAG GCATTAATGA AACCGCAGAG
ATTATGGCGC GTCCTATTAC TGTTAGCGAT GCTGTCAGTA GCGGTAATGC CAGTGAGATG
ATTGATAACG ACATTTTAGT CAACGTCAAT CAAGCAAAAA ATACAGAAAA TTCGATCAAT
CCTGATGACT ATTTTCCAGG TTATGAAAAT GATACTGAGG CGGTTAGCGC AAGTATCGAG
CAAGCCAAAA CGCCAAGCCC GATGGCGCGT AATAAAGGCA ATATCGTCAA GCGTCTCTAT
AATCGGTTGT TTAATGCAGG CTCACTTGCG CTACCATATG TAGACACCAC GATTTATTTG
CAACAAGCAG CGGCTGACAG TACCAATAAT AAGGCTGCCA AGCCCATACT AATCAAAGCA
GATGATGATG TGCAGCCCAT TAAGAACATC AAGGCGGCGC TTGATGACAC CACCGTGCAA
TCCGTTGTTG ACTTTACAGC AGCACTACCA CGCTTACGCC AAACCGCATT AGATGCGGCA
AAAGCGGTTG GTTACTATGA CGTGACTTTG CGTTTACGCC AGCCTTATAC AGACACGATT
GATGTCATCA TTGAAAAGCT GGGTGAGCCA GTACGCGTCG ATAGTCGAAT TGTCGATATT
CGCGGTGCAG GCAGTGAGCA AAAAGAATTT GCTGCGTTAG AAAAAGATTT GCCACCAAAA
GAGGGTGATA TTTTTAACCA CCGCGTCTAT AAAGACAGTA AATCTGCCCT TGAGTCGCTC
AGTAATACTT ACGGTTACTT TGATCAAGAT TGGTTAAATA AATCTGTCGA TATTATCTTA
CCTGACAACA CAGCGGATGT TTCGCTGGTT TACAATACCG GCAATCGTTA CGAGTTTGAT
GAAGTGGTGT TTTTTACTTA TGATGAAGAC TCGGGAACAC TGACACGTGA CCCTGAAAAA
CTGCCAGTTG AATTGTCATT GTTAAGACAG TTATTCGACT TTAAGGAGGG CGACCCTTTT
TATCGTCCTG CGGTGACCAA ATTCAGTAAT GATTTATCGG CGACCCGTTA TTTTAATACC
ATCAACGTTG AGTCGATTTT GCCGCCAGAT GAGCGCACGC AAAATGCTAC CTTAGCCTTT
GATAACTCAC CAAATGCTGA CAATACTATT GAAACGACAG ATGACGAAGT GAACAATGCT
ACTGATGTTA ATGCTCGCCA AATAGAGGGT GTTGGCAATG ACGGCGAGCT TTATACCAAT
AGCGGGGAAA AAGTGAATGC TGCCGATATT ACTGCTATTG AATTTGAAGC CGATGAAGAG
ACGCTTGAGA AGCTACAGGC GATTAAGCAA AAAGCAGAAC GCTTAAGCCG TCTGCCAAAT
GATCGTGTAT TGGATGAAAA AGGCCAAGAT TCAAACAGTA TTTTAGGCAA AATAAGTGAT
GCTATCAGTG ACGTTGCACA AAAGATATTC CCTGATGAGA AAAGCATACT GGCGGATGAG
AACTTCGTGC CACCGACATT GGTAGGGCGT AAAACACCGC AAGAAGTGTT AGAGAGCAAG
AAAGTACCAC TGTACGTGTT TGTGGCGGCG AATAAACCGC GCGATGCTCA GGTGGGTATT
GGTTATGGTA CGGATACGGG TGTCCGTGCA ACCGCGAAAA TAGATTATAA TTTGCTCAAT
CGTAAAGGCT ATCAGGCAGG GCTTGAGACA GAAGTTTCGA GAATTACTAA AAATGTCGGT
GTCTATGCTA GCCGGCCATG GAAACACCCT TTGAATGACA AGCTTGAAGC AAGTTTGATT
TATGAAGAAG AGGCGATTAA TCAAGGTGAA GGCAATTTCG ATTTGTCTAC CAAAACCCTA
AAAGGGTCGC TAGCGCGTAA TATCCGCCGT GAAAGTGGTT GGAATCGCAG TTACTCTCTG
CGTTACCGTT TAGATGAGTT AGAAACGGGT ATTGATGATG AAGCGCAGTT AAACAACCTT
CCTATTCGCT TTACGTCCTC AAAGCCTAGA CAGCAAGCAT TATTACTTGG TTATGGCGTT
AGTAAAACAG ATGTGGACAG TGCGACTAAT CCTACTAGCG GTATCCGCCA ATATTATTCG
ATTGAAGCGG GTGCTGACAA AGCGCTTAGT GATACCAATC TGGCAATCGC TCGCGCTGGC
GTCAGCGGTA TTTATAGCTT TGGTGCCGAT GATAAGCATC AAGTGCTTGG CAGTATCAAT
ACCGGTTATA TTTGGGCAGA TGACTTTGAT GAGGTACCTT ATAAACTGCG CTTCTTTGCT
GGTGGTGACC AAAGTATCCG TGGTTATGAC TACGAAAGCT TATCACCACT AGATAAAGGC
TATCTGACTG GTGGGCAAAT CCTCGCGGTC GGTAGTGCAG AGTATAACTA TGAGTTTAAA
CCCGGCTTTC GCGGTGCCGT TTTCACTGAC ATTGGTAATG CTTATGACAA AGATTTTGAC
ACAGATACTA AAGTCGGCGT CGGCGTTGGT ATTCGCTGGG CATCGCCCGT TGGCGTGGTG
CGCGTCGATG TCGCCGCTGG CGTGACAGAA GAGAGTATTC CAGTCAGGTT ACATCTGTTT
ATTGGCTCTC CTTTATAA
 
Protein sequence
MKHQPSTPAH NLAMMSPDTS DHQNDSIKSS AAINTNDTPR LYFTRTALFS ALTTSLVGFG 
CSLAPAAFAA TTDLNNSATN SQILVKIATA ALPKTSKAAI SDDAQASDTN QNLEQQAAAI
QQQGYQMMTP EEIDRELAAM DRQNAQYMDR IGTSNNSGFA APVATLDDRT PPLGLDVELD
ATNLPTPSNL DTLGINETAE IMARPITVSD AVSSGNASEM IDNDILVNVN QAKNTENSIN
PDDYFPGYEN DTEAVSASIE QAKTPSPMAR NKGNIVKRLY NRLFNAGSLA LPYVDTTIYL
QQAAADSTNN KAAKPILIKA DDDVQPIKNI KAALDDTTVQ SVVDFTAALP RLRQTALDAA
KAVGYYDVTL RLRQPYTDTI DVIIEKLGEP VRVDSRIVDI RGAGSEQKEF AALEKDLPPK
EGDIFNHRVY KDSKSALESL SNTYGYFDQD WLNKSVDIIL PDNTADVSLV YNTGNRYEFD
EVVFFTYDED SGTLTRDPEK LPVELSLLRQ LFDFKEGDPF YRPAVTKFSN DLSATRYFNT
INVESILPPD ERTQNATLAF DNSPNADNTI ETTDDEVNNA TDVNARQIEG VGNDGELYTN
SGEKVNAADI TAIEFEADEE TLEKLQAIKQ KAERLSRLPN DRVLDEKGQD SNSILGKISD
AISDVAQKIF PDEKSILADE NFVPPTLVGR KTPQEVLESK KVPLYVFVAA NKPRDAQVGI
GYGTDTGVRA TAKIDYNLLN RKGYQAGLET EVSRITKNVG VYASRPWKHP LNDKLEASLI
YEEEAINQGE GNFDLSTKTL KGSLARNIRR ESGWNRSYSL RYRLDELETG IDDEAQLNNL
PIRFTSSKPR QQALLLGYGV SKTDVDSATN PTSGIRQYYS IEAGADKALS DTNLAIARAG
VSGIYSFGAD DKHQVLGSIN TGYIWADDFD EVPYKLRFFA GGDQSIRGYD YESLSPLDKG
YLTGGQILAV GSAEYNYEFK PGFRGAVFTD IGNAYDKDFD TDTKVGVGVG IRWASPVGVV
RVDVAAGVTE ESIPVRLHLF IGSPL