Gene Psyc_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1506 
Symbol 
ID3515467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1829741 
End bp1830478 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content41% 
IMG OID637670195 
Producthypothetical protein 
Protein accessionYP_264788 
Protein GI71066061 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCA ATAAGTTGCC GAAGTCAGCA TGGTCTGATT CGGAAGCAGC TGGTTCTCAA 
TCGCAGCATA CTGACCAGCT ACCTAAGTAT CAGATGAAAC AAGATCAGGC AATATCAGCA
GGGAATATTG ACCGTGCTAG TAATGATGCC AGTTATATCC ATGTAGGTTG TAGTGAAGAA
TGTTTGGAGA GTCTGGCACA AGATATGTCT CAACAAAACA GCTTTTTTGG CTATAAAAGT
GTCAAAAAAA CTAATGTAAG CGCAATGCAC CCTAATGTAA TTGATAGCAA TACCTTTAAA
AGCAGTACGG TTGAAGTTAA TTCTATTAAG ACAAGTGTTT TTGAAGAATT TGAGCAATCC
ACAGTCGAAT TAACTCACAC TATATCTCCT AAAAACGCAG CAAGCGTTGC AGAGATACCA
GAGCGTATAT TTATGAATGG TCTTATTAGA TATACCGGCA TTGCCCTAGC GATTATCATA
CCGTTAGCTG TGTTCTCTGC TTATGCAGCG ACACCGCCTG TTACTCAAGC GGTTGCTAGC
AAATACATGA CTAACGCAAC GACAGAAATG CTCGCGGTTA AACCCAGTAG TATTATCCAT
AAATCTGCTA GTACACCGAC TACGCTAGAT AGTGTTGATT TAAAAAAATA TGCTGGTACT
TGGTATGAGA TTGGTCGATT GCCAATGTAC TTTCAGCGTA ACTGTGCCAG TGATGTGGCC
GCTAACTATA GTCGGTGA
 
Protein sequence
MQTNKLPKSA WSDSEAAGSQ SQHTDQLPKY QMKQDQAISA GNIDRASNDA SYIHVGCSEE 
CLESLAQDMS QQNSFFGYKS VKKTNVSAMH PNVIDSNTFK SSTVEVNSIK TSVFEEFEQS
TVELTHTISP KNAASVAEIP ERIFMNGLIR YTGIALAIII PLAVFSAYAA TPPVTQAVAS
KYMTNATTEM LAVKPSSIIH KSASTPTTLD SVDLKKYAGT WYEIGRLPMY FQRNCASDVA
ANYSR