| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1443 |
|---|
| Symbol | fdhD |
|---|
| ID | 3515401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 1747369 |
|---|
| End bp | 1748379 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637670130 |
|---|
| Product | formate dehydrogenase accessory protein FdhD |
|---|
| Protein accession | YP_264725 |
|---|
| Protein GI | 71065998 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
|---|
| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.727621 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGTTG AAAATAATGC CCAATATAGC GACCAAGTAT CGGCAGATAG CGTGTCTGAA
GACTTAGCCT TACCTGCGAC GCCGCTTGCA CGCAAACATA TGGCGCAAAA ACACGCTTAT
CCATTAAATG AGTATAGTCA CAATAGTATT GATATTGAGG GCTTTGATGA GATTCATATT
GATCGTCAGC TGGCAAGCTT GGCTGTGGAG GCCGCGATTT CTATTGTTAT CAATGGTATT
CACTATGCGG TACTAATGGC CAGCCCCAGC CAGCTTGAGT ACTTAGCCGT TGGGTTTTTG
TTCAGTGAGG GCTTGATTGA ACACAGTCAT GAGTTACTCG ATTGGGAAGT GACTCAGCTT
ACGGATAGCG CAAGCTTTGA AAATTTTACT GAGAACTCAA TTGACGAGAC TAATGTCTCA
ATGCCGTTTG AGCAGCTACA AGACTATGAT GTTTATGTGG TGGAATTGGT ATTAAACCAG
CGCTGCCATC AACGTATCCA AGCACAAAAA CGGCAGCTTG CAGGACGAAC AGGATGCGGC
ATGTGCGGGA TAACCGGACT GACACAAGCG CTGCCAGATT TGAGTGGTTA TGCACAGAAT
AAGCAACAGA ATGCGCAACA AGTCACGACA ACCAAACCAA GTCTTGATAG TTTACTGAAC
ATACGAGCAC AAGTCGATGC CAAGCAACAC ATGCATCAAT TAACAGGCGC GGTCCATGCG
GCTGCCACGA TGCAGGGTCA GCACTTGCAT CTATTTGAAG ATGTGGGACG CCATAATGCG
CTTGATAAAC TCATCGGTTG GCAGCTACGG CACAAGGTAG AGGTCGAGTG CGTGGTTATG
TCTTCGCGAT TGTCGATAGA ACTGGTACAA AAGTCTATTC GGGCTTACAT ACCGTGGCTG
GTTGGTATGT CCGCGCCTAC CAGTACGGCG GTGCGTGTCG CTCAGCGCTA CGGACTAGGG
TTGGCAGGGT TTTTACGTGA TAATAGAGTG ACTTATTATT CAAGACTGTA G
|
|---|
| Protein sequence | MIVENNAQYS DQVSADSVSE DLALPATPLA RKHMAQKHAY PLNEYSHNSI DIEGFDEIHI
DRQLASLAVE AAISIVINGI HYAVLMASPS QLEYLAVGFL FSEGLIEHSH ELLDWEVTQL
TDSASFENFT ENSIDETNVS MPFEQLQDYD VYVVELVLNQ RCHQRIQAQK RQLAGRTGCG
MCGITGLTQA LPDLSGYAQN KQQNAQQVTT TKPSLDSLLN IRAQVDAKQH MHQLTGAVHA
AATMQGQHLH LFEDVGRHNA LDKLIGWQLR HKVEVECVVM SSRLSIELVQ KSIRAYIPWL
VGMSAPTSTA VRVAQRYGLG LAGFLRDNRV TYYSRL
|
|---|
| |