More than 300 homologs were found in PanDaTox collection
for query gene Psyc_1443 on replicon NC_007204
Organism: Psychrobacter arcticus 273-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007204  Psyc_1443  formate dehydrogenase accessory protein FdhD  100 
 
 
336 aa  698    Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.727621 
 
 
-
 
NC_007969  Pcryo_1603  formate dehydrogenase, subunit FdhD  66.57 
 
 
337 aa  437  1e-121  Psychrobacter cryohalolentis K5  Bacteria  normal  0.41587  normal  0.291375 
 
 
-
 
NC_009524  PsycPRwf_0335  formate dehydrogenase, subunit FdhD  54.8 
 
 
379 aa  368  1e-101  Psychrobacter sp. PRwf-1  Bacteria  normal  0.727751  hitchhiker  0.00000000798764 
 
 
-
 
NC_002947  PP_0257  formate dehydrogenase family accessory protein FdhD  36.46 
 
 
276 aa  154  2.9999999999999998e-36  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0174674 
 
 
-
 
NC_010501  PputW619_4953  formate dehydrogenase family accessory protein FdhD  35.54 
 
 
276 aa  153  4e-36  Pseudomonas putida W619  Bacteria  normal  0.211752  hitchhiker  0.000061887 
 
 
-
 
NC_009512  Pput_0272  formate dehydrogenase family accessory protein FdhD  36.46 
 
 
276 aa  151  1e-35  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0108  formate dehydrogenase accessory protein  34.07 
 
 
278 aa  149  6e-35  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0103  formate dehydrogenase accessory protein  34.07 
 
 
278 aa  149  6e-35  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0108  formate dehydrogenase accessory protein  34.07 
 
 
278 aa  149  7e-35  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3012  formate dehydrogenase family accessory protein FdhD  36.02 
 
 
290 aa  148  1.0000000000000001e-34  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.492307 
 
 
-
 
NC_009901  Spea_0444  formate dehydrogenase accessory protein  32.75 
 
 
287 aa  147  2.0000000000000003e-34  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1873  formate dehydrogenase family accessory protein FdhD  31.9 
 
 
286 aa  147  3e-34  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0106  formate dehydrogenase accessory protein  33.95 
 
 
278 aa  146  4.0000000000000006e-34  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0107  formate dehydrogenase accessory protein  34.07 
 
 
278 aa  147  4.0000000000000006e-34  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010322  PputGB1_0282  formate dehydrogenase family accessory protein FdhD  35.74 
 
 
276 aa  146  4.0000000000000006e-34  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0280  formate dehydrogenase, subunit FdhD  35.53 
 
 
279 aa  146  4.0000000000000006e-34  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.345753  normal  0.175178 
 
 
-
 
NC_013457  VEA_000093  formate dehydrogenase chain D  34.78 
 
 
276 aa  146  4.0000000000000006e-34  Vibrio sp. Ex25  Bacteria  normal  0.257578  n/a   
 
 
-
 
NC_011663  Sbal223_0110  formate dehydrogenase accessory protein  33.95 
 
 
278 aa  146  4.0000000000000006e-34  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0748  formate dehydrogenase family accessory protein FdhD  32.61 
 
 
271 aa  146  4.0000000000000006e-34  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0111  formate dehydrogenase accessory protein  33.95 
 
 
278 aa  146  4.0000000000000006e-34  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4025  formate dehydrogenase accessory protein FdhD  34.89 
 
 
283 aa  145  7.0000000000000006e-34  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4092  formate dehydrogenase, subunit FdhD  36.26 
 
 
290 aa  145  8.000000000000001e-34  Ralstonia eutropha JMP134  Bacteria  normal  0.2892  n/a   
 
 
-
 
NC_010524  Lcho_2747  formate dehydrogenase family accessory protein FdhD  35.48 
 
 
292 aa  145  1e-33  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.0059323 
 
 
-
 
NC_012791  Vapar_3020  formate dehydrogenase family accessory protein FdhD  32.45 
 
 
278 aa  145  1e-33  Variovorax paradoxus S110  Bacteria  normal  0.848082  n/a   
 
 
-
 
NC_010087  Bmul_5399  formate dehydrogenase family accessory protein FdhD  34.7 
 
 
284 aa  143  3e-33  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.286085  normal  0.067336 
 
 
-
 
NC_010512  Bcenmc03_7065  formate dehydrogenase family accessory protein FdhD  34.7 
 
 
289 aa  144  3e-33  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.20274  normal  0.543352 
 
 
-
 
NC_008060  Bcen_1423  formate dehydrogenase family accessory protein FdhD  34.7 
 
 
289 aa  144  3e-33  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6406  formate dehydrogenase family accessory protein FdhD  34.7 
 
 
289 aa  144  3e-33  Burkholderia cenocepacia HI2424  Bacteria  normal  0.678396  normal 
 
 
-
 
NC_007651  BTH_I0569  formate dehydrogenase family accessory protein FdhD  34.73 
 
 
274 aa  143  4e-33  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1125  formate dehydrogenase family accessory protein FdhD  35 
 
 
290 aa  143  4e-33  Cupriavidus metallidurans CH34  Bacteria  normal  0.802085  normal 
 
 
-
 
NC_007005  Psyr_4945  formate dehydrogenase, subunit FdhD  31.95 
 
 
278 aa  142  6e-33  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_6444  formate dehydrogenase family accessory protein FdhD  33.77 
 
 
290 aa  140  1.9999999999999998e-32  Burkholderia ambifaria MC40-6  Bacteria  normal  0.274987  normal 
 
 
-
 
NC_007509  Bcep18194_C6967  formate dehydrogenase, subunit FdhD  35.07 
 
 
289 aa  140  3.9999999999999997e-32  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2635  formate dehydrogenase family accessory protein FdhD  35.74 
 
 
274 aa  139  4.999999999999999e-32  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.481847 
 
 
-
 
NC_012560  Avin_03800  formate dehydrogenase family accessory protein FdhD  33.98 
 
 
275 aa  139  4.999999999999999e-32  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0057  formate dehydrogenase accessory protein  35.56 
 
 
272 aa  139  4.999999999999999e-32  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0699  formate dehydrogenase accessory protein FdhD  33.81 
 
 
274 aa  139  7.999999999999999e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0665  formate dehydrogenase family accessory protein FdhD  33.95 
 
 
279 aa  139  7.999999999999999e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  0.223999  normal 
 
 
-
 
NC_006348  BMA0201  formate dehydrogenase accessory protein  33.81 
 
 
274 aa  139  8.999999999999999e-32  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2414  formate dehydrogenase accessory protein  33.81 
 
 
274 aa  139  8.999999999999999e-32  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0863  formate dehydrogenase family accessory protein FdhD  33.81 
 
 
274 aa  139  8.999999999999999e-32  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4644  formate dehydrogenase accessory protein  33.1 
 
 
272 aa  139  8.999999999999999e-32  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A2744  formate dehydrogenase accessory protein  33.81 
 
 
274 aa  139  8.999999999999999e-32  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2334  formate dehydrogenase accessory protein  33.81 
 
 
274 aa  139  8.999999999999999e-32  Burkholderia mallei NCTC 10229  Bacteria  normal  0.390052  n/a   
 
 
-
 
NC_009074  BURPS668_0684  formate dehydrogenase accessory protein FdhD  33.81 
 
 
274 aa  139  8.999999999999999e-32  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2769  formate dehydrogenase family accessory protein FdhD  35.36 
 
 
274 aa  138  1e-31  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0582  formate dehydrogenase family accessory protein FdhD  34.94 
 
 
274 aa  137  2e-31  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1390  formate dehydrogenase accessory protein FdhD  33.45 
 
 
306 aa  137  3.0000000000000003e-31  Methylococcus capsulatus str. Bath  Bacteria  normal  0.780868  n/a   
 
 
-
 
NC_008786  Veis_2382  formate dehydrogenase family accessory protein FdhD  35.66 
 
 
277 aa  137  3.0000000000000003e-31  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2105  formate dehydrogenase family accessory protein FdhD  34.98 
 
 
284 aa  137  3.0000000000000003e-31  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.719105  n/a   
 
 
-
 
NC_008542  Bcen2424_2717  formate dehydrogenase family accessory protein FdhD  34.98 
 
 
284 aa  137  3.0000000000000003e-31  Burkholderia cenocepacia HI2424  Bacteria  normal  0.546813  n/a   
 
 
-
 
NC_010508  Bcenmc03_2744  formate dehydrogenase family accessory protein FdhD  34.98 
 
 
284 aa  137  3.0000000000000003e-31  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.135991  normal 
 
 
-
 
NC_009832  Spro_0082  formate dehydrogenase accessory protein  35.9 
 
 
278 aa  137  4e-31  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_0719  formate dehydrogenase family accessory protein FdhD  34.55 
 
 
278 aa  136  4e-31  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3826  formate dehydrogenase family accessory protein FdhD  39.05 
 
 
313 aa  137  4e-31  Acidovorax citrulli AAC00-1  Bacteria  normal  0.145435  normal 
 
 
-
 
NC_008392  Bamb_5686  formate dehydrogenase family accessory protein FdhD  33.55 
 
 
290 aa  137  4e-31  Burkholderia ambifaria AMMD  Bacteria  normal  0.405303  normal  0.185398 
 
 
-
 
NC_010717  PXO_00469  formate dehydrogenase accessory protein  33.45 
 
 
273 aa  136  6.0000000000000005e-31  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0885199  n/a   
 
 
-
 
NC_007510  Bcep18194_A6044  formate dehydrogenase, subunit FdhD  34.6 
 
 
278 aa  135  7.000000000000001e-31  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp1050  formate dehydrogenase associated protein  35.34 
 
 
273 aa  135  8e-31  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0389  formate dehydrogenase family accessory protein FdhD  33.58 
 
 
273 aa  135  9.999999999999999e-31  Burkholderia phymatum STM815  Bacteria  normal  normal  0.318407 
 
 
-
 
NC_007951  Bxe_A4034  formate dehydrogenase, subunit FdhD  33.94 
 
 
279 aa  134  1.9999999999999998e-30  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.276271 
 
 
-
 
NC_010505  Mrad2831_0034  formate dehydrogenase family accessory protein FdhD  33.82 
 
 
280 aa  134  1.9999999999999998e-30  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.663186 
 
 
-
 
CP001637  EcDH1_4089  formate dehydrogenase family accessory protein FdhD  34.09 
 
 
277 aa  134  3e-30  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5346  formate dehydrogenase accessory protein  34.09 
 
 
277 aa  134  3e-30  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_4122  formate dehydrogenase accessory protein  34.09 
 
 
277 aa  134  3e-30  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_03780  formate dehydrogenase accessory protein  34.09 
 
 
277 aa  133  3.9999999999999996e-30  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_0391  formate dehydrogenase family accessory protein FdhD  30.74 
 
 
274 aa  133  3.9999999999999996e-30  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_0200  formate dehydrogenase family accessory protein FdhD  34.31 
 
 
272 aa  133  3.9999999999999996e-30  Thauera sp. MZ1T  Bacteria  normal  0.754057  n/a   
 
 
-
 
NC_012880  Dd703_0073  formate dehydrogenase accessory protein  35.14 
 
 
277 aa  133  3.9999999999999996e-30  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03729  hypothetical protein  34.09 
 
 
277 aa  133  3.9999999999999996e-30  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5920  formate dehydrogenase family accessory protein FdhD  34.67 
 
 
279 aa  132  6e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1517  formate dehydrogenase family accessory protein FdhD  33.82 
 
 
310 aa  132  6e-30  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.0766825 
 
 
-
 
NC_004578  PSPTO_5406  formate dehydrogenase accessory protein FdhD  34.23 
 
 
278 aa  132  6.999999999999999e-30  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A4123  formate dehydrogenase accessory protein  34.21 
 
 
266 aa  132  9e-30  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4425  formate dehydrogenase accessory protein  34.21 
 
 
266 aa  132  9e-30  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_68430  putative formate dehydrogenase accessory protein FdhD  34.3 
 
 
279 aa  132  9e-30  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.270823  normal  0.596134 
 
 
-
 
NC_010658  SbBS512_E4374  formate dehydrogenase accessory protein  34.21 
 
 
266 aa  132  9e-30  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4282  formate dehydrogenase accessory protein  34.39 
 
 
267 aa  132  1.0000000000000001e-29  Escherichia coli SMS-3-5  Bacteria  normal  0.715148  normal 
 
 
-
 
NC_003910  CPS_2059  formate dehydrogenase accessory protein FdhD  31.29 
 
 
277 aa  130  2.0000000000000002e-29  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0806  formate dehydrogenase accessory protein  31.23 
 
 
276 aa  131  2.0000000000000002e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_4120  formate dehydrogenase accessory protein  34.44 
 
 
274 aa  130  3e-29  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3771  formate dehydrogenase accessory protein  34.44 
 
 
274 aa  130  4.0000000000000003e-29  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_1654  formate dehydrogenase family accessory protein FdhD  31.73 
 
 
282 aa  129  8.000000000000001e-29  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_1352  formate dehydrogenase family accessory protein FdhD  31.73 
 
 
282 aa  129  8.000000000000001e-29  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_0036  formate dehydrogenase accessory protein  34.07 
 
 
274 aa  129  9.000000000000001e-29  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2557  formate dehydrogenase accessory protein  32.85 
 
 
269 aa  127  2.0000000000000002e-28  Jannaschia sp. CCS1  Bacteria  normal  0.266553  normal 
 
 
-
 
NC_012857  Rpic12D_4388  formate dehydrogenase family accessory protein FdhD  36.03 
 
 
271 aa  127  3e-28  Ralstonia pickettii 12D  Bacteria  normal  0.915911  normal  0.955368 
 
 
-
 
NC_010678  Rpic_4278  formate dehydrogenase family accessory protein FdhD  36.03 
 
 
271 aa  127  3e-28  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0994  formate dehydrogenase family accessory protein FdhD  31.27 
 
 
295 aa  127  3e-28  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.506851  normal 
 
 
-
 
NC_007958  RPD_0622  formate dehydrogenase accessory protein  31.97 
 
 
275 aa  126  5e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3088  formate dehydrogenase accessory protein  31.23 
 
 
278 aa  125  7e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_4083  formate dehydrogenase accessory protein  35.13 
 
 
278 aa  125  8.000000000000001e-28  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_4159  formate dehydrogenase accessory protein  33.7 
 
 
277 aa  124  2e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3819  formate dehydrogenase accessory protein  32.34 
 
 
269 aa  124  3e-27  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.934196  n/a   
 
 
-
 
NC_008687  Pden_2855  formate dehydrogenase family accessory protein FdhD  31.46 
 
 
273 aa  123  4e-27  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_4441  formate dehydrogenase accessory protein  33.33 
 
 
277 aa  123  5e-27  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_1081  formate dehydrogenase accessory protein  36.03 
 
 
271 aa  123  6e-27  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C4365  formate dehydrogenase accessory protein  34.74 
 
 
278 aa  122  6e-27  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A4319  formate dehydrogenase accessory protein  34.74 
 
 
278 aa  122  6e-27  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.25899  normal  0.917498 
 
 
-
 
NC_011094  SeSA_A4252  formate dehydrogenase accessory protein  34.74 
 
 
278 aa  122  9e-27  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.720037 
 
 
-
 
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