Gene Psyc_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1390 
Symboldhaa 
ID3515348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1680540 
End bp1681691 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content44% 
IMG OID637670077 
ProductD-3-hydroxyaspartate aldolase 
Protein accessionYP_264672 
Protein GI71065945 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.940075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACTG AAGAATTAGA AGTAGGTTAT AACGTACCCG CCACTGTTGG TATGGACGAA 
GCTGACATTC AAACCCCTTG TTTGATCTTG GATCTTGACG CCCTTGAGCG TAACGTCAAA
AAAATGGGCG ATTATGCTAA AGCGCATAAT ATGCGTCACC GTAGTCACGG TAAAATGCAC
AAATCTGTCG ATGTACAAAA CTTACAAGAA GAACTTGGCG GCGCAATCGG CGTATGCTGT
CAAAAGGTCT CTGAAGCGGA AGTGTTCGTA CGTGGCGGTA TCAAAGACGT ATTGGTATCA
AACCAAGTCC GCAATCCAGC CAAAATTGAG CGCTTAGCCA ATTTGCCTAA GCTGGGCTCA
ACCATCACCG TTTGTGTCGA TGATATCGAT AACGTCGCTG AGCTATCAGC TGCTGCAACC
AAAGCAGGCA CTGAACTGAA CTGTTATATC GAAATCGACT GTGGCGCTGG ACGTTGTGGT
GTCACGACGA CTGAAGCTGT AGTAGAGATT GCCAAAGCGA TTGATGCCGC TGAAAATTTA
AAATTCACTG GTATTCAAGC CTATCAAGGT GCCATGCAGC ATATGGACAG CTTTAGCGAT
CGTAAAGCTA AAACACAAAT CGCTATTGAT CAGGTACAAG AAGCAATCGA TGCGCTAACA
GAGATCGGTC TTAAGCCAGA ATTTGTTTCA GGTGGCGGTA CTGGTAGTTA TTATTTCGAA
AGTAATTCAG GTGTTTTCAA CGAATTACAG TGTGGCTCTT ACGCGTTTAT GGATGCGGAT
TATGGTCGTA TTCTAGACGA AGACGGCAAC CGTATCGATG CGGGTGAATG GGAAAATGCC
TTATTCATCC TAACTTCTGT TATGAGCCAT GCCAAAGCTG ACAAAGCCAT TGTTGATGCC
GGTCTAAAAG CTCAGTCAGT TGACAGCGGC CTACCCTTTG TCTATGGTCG TGACGATGTT
GAATATGTTA AATGTTCAGA CGAGCATGGC GTAGTCAGCG ATCCAAATGG CGTACTTGAA
ATCAATGAAA AATTAAAACT GGTACCTGGT CATTGTGATC CTACTTGTAA CGTTCATGAT
TTTTATATTG GTGTGCGTAA TGGTAAAGTT GAAACCGTAT GGCCAGTATC TGCACGCGGT
AAAATGTACT AA
 
Protein sequence
MITEELEVGY NVPATVGMDE ADIQTPCLIL DLDALERNVK KMGDYAKAHN MRHRSHGKMH 
KSVDVQNLQE ELGGAIGVCC QKVSEAEVFV RGGIKDVLVS NQVRNPAKIE RLANLPKLGS
TITVCVDDID NVAELSAAAT KAGTELNCYI EIDCGAGRCG VTTTEAVVEI AKAIDAAENL
KFTGIQAYQG AMQHMDSFSD RKAKTQIAID QVQEAIDALT EIGLKPEFVS GGGTGSYYFE
SNSGVFNELQ CGSYAFMDAD YGRILDEDGN RIDAGEWENA LFILTSVMSH AKADKAIVDA
GLKAQSVDSG LPFVYGRDDV EYVKCSDEHG VVSDPNGVLE INEKLKLVPG HCDPTCNVHD
FYIGVRNGKV ETVWPVSARG KMY