Gene Psyc_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1374 
Symbol 
ID3515332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1658537 
End bp1659637 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content38% 
IMG OID637670061 
Productpatatin-related protein 
Protein accessionYP_264656 
Protein GI71065929 
COG category[R] General function prediction only 
COG ID[COG3621] Patatin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.19767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAC TAGAAAAAAC TGAGCCAGTG GATGGACTTT TAGAAATCTC AGAACCAATT 
AAAATTTTAG CGTTAAATGG TGGGGGTGTA CGCGGGCTAT TTACTATTAC GTTGCTTGCC
GAACTTGAAT CAATCATTGA AAAGCGTGAA AAACGTGAAA ATGTCAAAAT TGGTGACTAC
TTTGACCTGA TTACCGGTAC ATCTATTGGT GGTGTTTTGG CACTTGGATT GGCAAGTGGT
AAAAGTGCGC GAGAACTAAA GGAAGTATTT GAAAAAAGTG CACCTGATAT TTTCCCTGTA
GGACGTTTCA GATTCAAGAA ATTGATCACA CTATTTTATC CAATCTACAG AAGTGATCCT
TTATACGAGA CTGTGAAAAG TATGATCGGT GACAATATCA AGTTCGATGA CCTTGAGCGC
CGAGTAATGA TTACGTCATT GAACCTTTCC ACTGGTAAAC CAAAATTTTT CAAAACACCA
CATAATCCCA TGTTTACGTT TGATGGCGAA ATCAAATTGA TTGATGCGGC AATGGCTACA
TCAGCTGCAC CAACCTATTT TAAACCACAT TTCATTAGTA AACTGAATCA CTATTTCGTT
GATGGTGGAT TAGTTTCTAA TAACCCTAGT TTTATAGGTG TTCGTGAAGT CTTGATAGAT
ATGAAAGATG ACTTCCCGAA TGCAGAGCCT AAAGATGTGA AAATTCTGAA TATTGGTACT
TTGAGCGAGA ATTACTGTAT TGGTCCCAAG ACGTTATCTA AAAAATGCTC GAAGGGTTAC
TTAGGATTAT GGGGAATGGG GGAGCGTCTT GTTTTAATTA CTATGACTGC TAACCAACAC
TTACAGCGTT TTATGTTGCT ACGGGAACTA AAAGTGCTTG GTATTTCCAA TAATTACGTT
GAAATTGATG AAACCATTCC AAACGAAGCG TCCTCTGACA TTACTTTAGA TAATGCATCC
CAGAGTAGCT TAAATGCCTT AAAAGGTATG GGAAAAAAAT TGGGTGCTGA GAGATACAGC
GAAGTTAAAG AATTACGCGA TTTCTTCTTA AAAACAGCGA AACCGTTTGT CAAATCTCAT
AGTAATGGAG CATCAGCATG A
 
Protein sequence
MATLEKTEPV DGLLEISEPI KILALNGGGV RGLFTITLLA ELESIIEKRE KRENVKIGDY 
FDLITGTSIG GVLALGLASG KSARELKEVF EKSAPDIFPV GRFRFKKLIT LFYPIYRSDP
LYETVKSMIG DNIKFDDLER RVMITSLNLS TGKPKFFKTP HNPMFTFDGE IKLIDAAMAT
SAAPTYFKPH FISKLNHYFV DGGLVSNNPS FIGVREVLID MKDDFPNAEP KDVKILNIGT
LSENYCIGPK TLSKKCSKGY LGLWGMGERL VLITMTANQH LQRFMLLREL KVLGISNNYV
EIDETIPNEA SSDITLDNAS QSSLNALKGM GKKLGAERYS EVKELRDFFL KTAKPFVKSH
SNGASA