| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1278 |
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| Symbol | secF |
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| ID | 3515235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 1540602 |
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| End bp | 1541846 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637669966 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_264562 |
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| Protein GI | 71065835 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000278006 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCG ATAATAACAA CCCTCTAGAA CAACAGAACA ATCCTGAACC GAACGGCTCA
AATAGTGAAG CAAGCACGCG TCGCCGTAAA AAACCGCGTC GTGATGGCAA AGGTAGTAAT
ACCCAAACCA ATAACGCCAC TGCTAAGAAA TCAGCTGGTA AAACTAAGCG TAGTGGCAAA
GGCGCTGATA CAGGCAGTCA AGTACTCGCG ACTACTGCTA TCGATCCCAA CTTGGCACTA
GGTGACGCCG CTGATGATGC AGCTGCCTAT GCCGAAGGCG GTATCAAAGC CGTCGGTGAT
CAGCGTATTA TCCCTTTTAT GAAGATAGAA AAGCCAATGG GAATTTTATC AATCATTTTG
GTGATTGGTA GTATTATTGC GATTGCAGTC AATGGCTTAA ACCTTGGTCT CGATTTTACC
GGCGGCGTGT CAGCAGATGT GCGCTATGAG CAATCTGTCG AGCAGGGTGA TGTGGTCAAT
GCGTTAGCAG ATAATGGCTT TGATGATGCA GTCGTGCAAT ATCTAGGCAC CTCGCAAGAG
CTGCTAATAC GCTTACCACC TCAATCTGAT AACATCGATG GTCTTAACAC CAGCCTGAGC
GAAGCTTTAG CGCTACCTAA TAACAATGTT GAAATCAGCA ATGTTAATAT TATCGGTAGT
CAAGTGGGTA ATGAGGTTTA CTTAAGCTCA GTCATGTCGA TTGTGCTCGC ACTAGCATGT
ATGCTTGGAT ATGTCGCCCT GCGCTTCCAG TTCAAACTGG CGCTTGGCGC GGTATTGTCC
TTGTTCCATG ATGCTATCGT TACCATCGGT GTCTTTGCTT TATTTGGTTT CCCATTCGAC
TTAACGGTAC TAGCAGCTAT CTTGGCATTA ATTGGTTATT CATTGAACGA TACTATCGTC
GTTTATGACC GTATCCGTGA GAACTTCCGC CGTGTTCGTG GTATTAGTCC GCGTCAAACG
ATTGATTTGT CATTGACAGA GACACTACGT CGTACGATTA TGACTATCTC AACCGTGCTA
TTAGTGGTAT TAGCAATGCT GTTCCTAGGC GGTGATGGCT TATTCTGGTT CTCAGCTGCG
CTATTTATTG GTTTGCTTGC TGGTACTTAT TCATCTACCT ATATTGCAAG CTCGATTCCT
CTAGCGATGG GTCTGTCACG TGATGACTTT ATCGTTAAAG TAAAACCTGA GTTTGAAGAA
GAAATTGTGA CTTTCAATGA TCCAAAGATG TTTGAACAAG ATTGA
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| Protein sequence | MAIDNNNPLE QQNNPEPNGS NSEASTRRRK KPRRDGKGSN TQTNNATAKK SAGKTKRSGK
GADTGSQVLA TTAIDPNLAL GDAADDAAAY AEGGIKAVGD QRIIPFMKIE KPMGILSIIL
VIGSIIAIAV NGLNLGLDFT GGVSADVRYE QSVEQGDVVN ALADNGFDDA VVQYLGTSQE
LLIRLPPQSD NIDGLNTSLS EALALPNNNV EISNVNIIGS QVGNEVYLSS VMSIVLALAC
MLGYVALRFQ FKLALGAVLS LFHDAIVTIG VFALFGFPFD LTVLAAILAL IGYSLNDTIV
VYDRIRENFR RVRGISPRQT IDLSLTETLR RTIMTISTVL LVVLAMLFLG GDGLFWFSAA
LFIGLLAGTY SSTYIASSIP LAMGLSRDDF IVKVKPEFEE EIVTFNDPKM FEQD
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