| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1273 |
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| Symbol | |
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| ID | 3515230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1532054 |
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| End bp | 1535059 |
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| Gene Length | 3006 bp |
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| Protein Length | 1001 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637669961 |
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| Product | membrane-bound lytic murein transglycosylase D precursor |
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| Protein accession | YP_264557 |
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| Protein GI | 71065830 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3858] Predicted glycosyl hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000430428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACTG TGTCATCAAA CTATCGCTCA TTCATAGCTT TACCACTGAC GCTTGCGGTG
TCAACTCTCC TTATCAGTGC TTGTAGTAAT ACATCAGCGG TGAAAAAGAC GGGTGCGACT
GGTAGCACAG CTTTGGTTAA TAAGCATCCG GCCACCCAAG TGCAGTCGGC GGGAAATGCA
GACTATTCGA CAGCATTTTT GGATGCTGAG AGCTTGGATG AGCTTGCTGA CTTGTTAGAA
GCCACCGACA TGACCATGGT TGAGGGCAAC AAACTTGCCA TTCAACAATA TGGTGACTTG
TGGAATCGCC TGCGTGCTGG GTATCGCATG AACGGTGGAC AGCCGGTTTA TAATCAGCGT
ATTGAAGCAC AAAAAGGCTG GTTTACCAGT AGACAAGACT ATCTAAACCG CTTAACGGCG
CGCGCCAGTC GCTATATTTA CCACACAGTA CGAGAAGCTG AGCGTCGTAA TATCCCAACC
GAGCTGGCTT TGCTCCCTGT GATTGAGAGC TCGTATGATC CAAGTGGTAC CAGTAGTGCG
GCAGCAGCAG GCTTATGGCA GTTTATCCCG AGTACGGGGC GTATTTATGG TCTAAATCAA
AGCAGCACTT ACGATGGTCG CCGTGATGTG ATTGAATCAA CGCGTGCCGC TTATGACTTT
TTGACAGCAT TGCATAATCA GTTCGGTAGT TGGGAGCTGG CATTAGCGGC TTATAACGCT
GGTCCTGGGC GTGTGCAAAA AGCCATTGAT GCCAATAGAG CTCAAGGCTT ACCTACTGAC
TATTGGTCAC TTAGATTACC GACTGAAACC ATGAACTATG TACCACGCTT TTTAGCGGTT
GCCGAAATCG TTGCTAAGCC TGAGAAATAT GGCGTCTATT TACCGGCTAT CGCTAACCGT
CAGCATTTCC GTAGTGTGCC TGTCAACTAT GGCGTAAGCT TAGCCGAAGT ATCGCAAGTG
ACGGGTGTTA GCTACGATGA GTTAGAAAGA TTAAATACGG CGTTAACCTC AGCGCGTATC
GACTCATCAG GTCCGCAGCG TATTATCATT CCTAATGATG TCAGTCTGAC CACTGATGTG
AAGCTGAGCG CTTTGAGGGG TAATGGCAGT AGTAATATTC TTGCCTCTAG CAATGCTGTT
ACGACGACTA CGCCAAGTTA TTCTGGGTCA ACAACGCCAA GCTATAACAA TAAGCCATAT
ACTACCAGCT CATCATTGCC GGGTACTGGC AAGGGTCTTG CTGATTATGC TGCCAGTGCC
AGCGTCCCGC AGCAAACCAC CAGCTATATC CCGCCATCGT CATCAATGAC CAGCAGCTCA
GTTTATAGCA GCAGTGCCTC AGTGCGCACT GAACCACTAT TGACGTCGGC AGAAACCAAA
AAAATCAACG CTGAGCTGAA AAGTAGCAAT AGCTTACCGA CCACATCAGC GCAAATTACT
CAGAACAATA CCATCATTCA AGAGCCGCCA TTAAGCAAAG CTGAGCGTGA TTTTATTGCC
AATCAAATTC GTATTAATAC GCCTGAAACC AATGTTATTA ACGCAGATGG TAATATCAAT
CTATCTGCCG TCCAGACGCA GCAGTCTATT TTGGAAGCAT CTGGTCAAGA AAAGAAACTG
AGCTTTCCAA AAACCTCAGT CAGCAAGCCA ACACCTCAAG GTGTAAGAAG CACCTATACG
GTCAAACGTG GTGATACGCT ATCCAATATC GCCAGTCGTG CGGGTGTAAG CTGGCGCGAT
ATTACCGAAT GGAATCAGAT AGATGTTAGT GCCAATCTCC TCTCTGGTAG TACCTTATAT
TTATACAATG CCAAAACCAT TGAGCCATTG AGTGCTACTA GCAGCACTGT CGCGAGCCAG
CCTGAAAGCT ATGTAGTACA AGGCGGCGAC ACGCTTATAG GTACTGCCAA TCGTTTTGGT
TTATCAGTGA CGCAGTTGGC AAGTTATAAT AATTTGAGCA GCCGTGCTGA CCTGTTAAGA
GGTCAGAAAC TATGGCTTAT CCCAGGCAAA GTAACAGCGC CAGTCAGCAC TCCTGCCGCG
CCATCTACTA AACCGAAGAA GTCATCGACT GCGACCAAAA ACTATAAAGT CAAAGCGGGT
GATGGCTTGA TCGCGCTTGC ACGCCAATTT AATATAACGA CTGAGACATT AGCCAGCCTC
AATAATATTG GCACGACAGA TTCATTATAT GTCGGTCAAA CATTGAAAGT ACCTGCCAGT
GTAGACTTTA CTTCTAGCAG TGCGCCTACT CATACACCGA GCGCCACTAG TAGCAATAAC
ACCACAACTA AAGCCAGCAG CTCAAGCTCA GGACCGACGA CCAATTACAA AGTCAAATCA
GGGGATACCT TGATTGGCAT TGCCAATAGT GTTGGGGTTA GCGCAGAAGA TATTGCTGCC
GTAAACAGTA ATTTTGATGC TAAGGCGCGT TTGCAACGTG GACAAACCAT TAAAGTACCC
GTATCAAAAG AATTGGTTGA TCGTCAGCTG AATGATGAAG CAGTCAGCTA TAAGATAAAA
TCAGGCGATA CTTTGACTGG TGTTGCTCAG CGTTACAATA TTGGCTTGGG AGATTTGGCA
GCAGCCAATA ATCTCAAGAC CAGTTCTAAC TTGATATTGG GTCGCACGAT TACTATTCCT
GCTAAAGGTA GTGTCAATGC TTCTGATAGT GCACCAGCTA CCAGTAATAG TGGCAAAAAG
TTAGGTAATA CAGAAAGCTA CAAAGTTCAG TCTGGCGATG GACTCATTGC TTTAGCACGA
CGCTTTGATG TTTCAGTTGA AGACTTGGCT GCTACTAATG ATATGACGAC CAAAGCCCAG
TTACAGCGTG GTCAAACCAT CAAAGTACCG AAACTAACGG TCAGCTATAC AGTTGGCTCA
GGAGACAGCT TGATTGGGCT GGCACGTAAA TACGATGTTT CAACCAAAGA GCTTGCGGAT
ATGAATAACA TTGCAGTGGA TACGATGCTG CAACGCGGTC AACGCTTAAC GGTGCCTAAC
CGCTAA
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| Protein sequence | MSTVSSNYRS FIALPLTLAV STLLISACSN TSAVKKTGAT GSTALVNKHP ATQVQSAGNA
DYSTAFLDAE SLDELADLLE ATDMTMVEGN KLAIQQYGDL WNRLRAGYRM NGGQPVYNQR
IEAQKGWFTS RQDYLNRLTA RASRYIYHTV REAERRNIPT ELALLPVIES SYDPSGTSSA
AAAGLWQFIP STGRIYGLNQ SSTYDGRRDV IESTRAAYDF LTALHNQFGS WELALAAYNA
GPGRVQKAID ANRAQGLPTD YWSLRLPTET MNYVPRFLAV AEIVAKPEKY GVYLPAIANR
QHFRSVPVNY GVSLAEVSQV TGVSYDELER LNTALTSARI DSSGPQRIII PNDVSLTTDV
KLSALRGNGS SNILASSNAV TTTTPSYSGS TTPSYNNKPY TTSSSLPGTG KGLADYAASA
SVPQQTTSYI PPSSSMTSSS VYSSSASVRT EPLLTSAETK KINAELKSSN SLPTTSAQIT
QNNTIIQEPP LSKAERDFIA NQIRINTPET NVINADGNIN LSAVQTQQSI LEASGQEKKL
SFPKTSVSKP TPQGVRSTYT VKRGDTLSNI ASRAGVSWRD ITEWNQIDVS ANLLSGSTLY
LYNAKTIEPL SATSSTVASQ PESYVVQGGD TLIGTANRFG LSVTQLASYN NLSSRADLLR
GQKLWLIPGK VTAPVSTPAA PSTKPKKSST ATKNYKVKAG DGLIALARQF NITTETLASL
NNIGTTDSLY VGQTLKVPAS VDFTSSSAPT HTPSATSSNN TTTKASSSSS GPTTNYKVKS
GDTLIGIANS VGVSAEDIAA VNSNFDAKAR LQRGQTIKVP VSKELVDRQL NDEAVSYKIK
SGDTLTGVAQ RYNIGLGDLA AANNLKTSSN LILGRTITIP AKGSVNASDS APATSNSGKK
LGNTESYKVQ SGDGLIALAR RFDVSVEDLA ATNDMTTKAQ LQRGQTIKVP KLTVSYTVGS
GDSLIGLARK YDVSTKELAD MNNIAVDTML QRGQRLTVPN R
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