| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1272 |
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| Symbol | |
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| ID | 3515229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 1530723 |
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| End bp | 1531931 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637669960 |
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| Product | soluble lytic transglycosylase |
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| Protein accession | YP_264556 |
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| Protein GI | 71065829 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGAA TTACTTATCG TGCGAAAGCA ACTGCGCGAG GGGCTAAACG CCGTATCTCA
TATATATTGC GTCCATCTAA ACGCTTGCTA AACACCGAAA GTAACATCGT TCCAGCTGTT
GTATCTATTA AAGTTACTCG TTTCGCCAAA ACTAAGAAAT TGGCGCAAAT ATCAAGCATT
GCCCTACTCT CACTCCCTGC TGAGAGTCTG ATGACCATGA ATACGCAAGT ACCAGCTTAT
GATCATGTTA TGCTGGAGAA AACCTTGACC ATCGCTGCTG TTCCAGGTGA TAGCACCTAT
TTTGCGACAG ATGGCTTCCA ACATGGCTTT GGTTACGACT TAGTGCGTAG CTATGCCGAT
GAGCTTGGGG TAAAAGTCAC TCTTAAAGCT TATGCAGATG AGAAAACTGC GCTAAGAGCT
TTACAATCAG GCGATGCGGA CATGGCATTG ACTACTGCCA GCACTCAATT AAAAAGCCAA
CTTAACCTGT CTTCTATTAA TGTCAGCTGT GGTTATGATG CCAGTTTGAC CAAAAATGGC
TTACATCCGA AAGTAAGCTG GACATTCAAC TCTGCCAATG ATCCATTGTC ACAAAAAGCC
AGCTATTTTT TATGTGATAG CATCAAGCTT GACAACACTC AAAAGTTAGC CGCTTTTTAT
AATCAAGACC TATTAAAAGA TGCTTATAGT CAAGACCATT TCAAAACCAC GCTGACAGAA
AAACTGCCAG ATTATCGCTC TTCCTTTGAA GAACAAGCAC GTAACTACAA TCACGACTGG
GAGCTTTTGG TTGCCATGGG CTATCAAGAG TCGCACTTGG ATGCCAATGC GGTCTCTCCG
ACCGGTGTAC GCGGCATTAT GATGCTGACC AACAATACCG CAAAGGCAAT GGGCGTCTCA
GACCGTGTTG ACCCTTACCA AAGTATCGGC GGCGGTGCTC GTTACTTGGA GCAGATGAAA
ACTGATTTTG CCGATGTTCC AAAAACAGAT CGTATTTGGT TTGCGCTTGC TGCTTATAAT
ATGGGACCAA ATGCTGTTAA AGGTATTCAG CGTAAATTGA GTGCTAAAGG TATCGACGAC
AAAAGCTGGG CAAATATATA TGCCTACCTG TCTGATAATA AAGCGTCAAA CAGCCGCTAT
GGTCAAGCCA TGCATTATGT GAGCAATATC AGAAGCTATC TTGAAACGAT AAAGACTGCG
ACGGTCTAA
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| Protein sequence | MPRITYRAKA TARGAKRRIS YILRPSKRLL NTESNIVPAV VSIKVTRFAK TKKLAQISSI
ALLSLPAESL MTMNTQVPAY DHVMLEKTLT IAAVPGDSTY FATDGFQHGF GYDLVRSYAD
ELGVKVTLKA YADEKTALRA LQSGDADMAL TTASTQLKSQ LNLSSINVSC GYDASLTKNG
LHPKVSWTFN SANDPLSQKA SYFLCDSIKL DNTQKLAAFY NQDLLKDAYS QDHFKTTLTE
KLPDYRSSFE EQARNYNHDW ELLVAMGYQE SHLDANAVSP TGVRGIMMLT NNTAKAMGVS
DRVDPYQSIG GGARYLEQMK TDFADVPKTD RIWFALAAYN MGPNAVKGIQ RKLSAKGIDD
KSWANIYAYL SDNKASNSRY GQAMHYVSNI RSYLETIKTA TV
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