| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1270 |
|---|
| Symbol | algW |
|---|
| ID | 3515227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 1527217 |
|---|
| End bp | 1528545 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637669958 |
|---|
| Product | serine protease |
|---|
| Protein accession | YP_264554 |
|---|
| Protein GI | 71065827 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000000478038 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCAT CCCCGAATGC CAATAACAAG GCTGGTCTAT TAAGATGGTT ACCTTGGATT
TTACTGTTGG TGGTTACTGC CGCCTTTATT TGGCTATTTG CGAGTATGAA GACAGCATCG
GAGGCAAAAT GGGAGCCGCC AAGGACCACG CCTGCTGAGC AGCAAGCCTC TGAACCGGTA
TCAGACGCGT CAACACCTAT TGCTTCTTAT CATAATGGTG TGGCTCGTGC CTCGCAATCA
GTCGTCAATA TTTATACTAC GCAGACGATG GCAGAACACC CTTATATGAA TGATCCAGTT
TTGCGCCGGT TTTTTGAATA CCATGGTGGG CCGTCAGAAG AGCAGGGCAA TACGAATCTG
GGGTCAGGCG TTATCGTCTC AGAAGATGGC TATATCGTGA CCAATGCGCA TGTCATCGAA
AAAGCCGATG AGATTACCGT TGCTTTTAAT GATGGTCGTA AAAGCCGTGC GAAATTAATT
GGCACAGACC CAGACAGTGA TTTGGCGGTG ATTAAAGTCG ATATGACTGG TTTGACCCCT
TTGGGCTTTC GTGAAAAACC AACGCTTGTA GGCGATGTGG CACTAGCGAT TGGTAATCCA
TTTGGCGTCG GTCAAACCAT TACCCAAGGC ATTATTTCAG CGACCGGACG TACAGGGCTT
GGCGTCAATA AGTTTGAAGA CTTTATCCAA ACCGATGCAG CTATCAATCC GGGTAACTCG
GGCGGTGCAT TAGTCGATGC ACGCGGTGAG CTGATTGGTA TTAATACGGC TATTTACTCA
CGCTCTGGTG GCTCTATGGG TATTGGCTTT GCCATTCCTA CCGCTATCGT CGAGCAAGTG
ATGAATGCTC TGATCAAAGA TGGCAAGGTC AGTCGTGGTT GGCTGGGTAT TGAGATACAG
TCACAGCTGA GAGATCCGAC CCAGCTTGAA ACGTCTACAG GCGTAGAAGT GCTCGACGTG
GTTCCTAAGA GTCCAGCTGC CAAGAGCGGT CTGAAAGTGG GTGATATTGT TTTGACCATT
GATGGGGTGG AGATGACCGA TGCCAACACC TTGATTCAGT ATGTCGCGCG TAAAGCTCCC
AATACCACGC TGCAGGCTCA AATCTTACGT CAAGGTAAAA ACGCACAAGT GAAGATATTG
CTAGAGGAGC GTCCGGTCGA AGAGCCTGTC ACCGTGCCCG TTGTGATCCA AGATGAGATG
CTTGGAGGTG CTCAGCCGCC AAGCCTACAA GCTCCAGAAC AAGACACCCC TATGATGTCA
GAGGCAGAGC GTGACCGTAT GCGTGAAGAG CTTTTATTAC TGTTCGAAAG AGATGGTGCA
CCTTTATAA
|
|---|
| Protein sequence | MSSSPNANNK AGLLRWLPWI LLLVVTAAFI WLFASMKTAS EAKWEPPRTT PAEQQASEPV
SDASTPIASY HNGVARASQS VVNIYTTQTM AEHPYMNDPV LRRFFEYHGG PSEEQGNTNL
GSGVIVSEDG YIVTNAHVIE KADEITVAFN DGRKSRAKLI GTDPDSDLAV IKVDMTGLTP
LGFREKPTLV GDVALAIGNP FGVGQTITQG IISATGRTGL GVNKFEDFIQ TDAAINPGNS
GGALVDARGE LIGINTAIYS RSGGSMGIGF AIPTAIVEQV MNALIKDGKV SRGWLGIEIQ
SQLRDPTQLE TSTGVEVLDV VPKSPAAKSG LKVGDIVLTI DGVEMTDANT LIQYVARKAP
NTTLQAQILR QGKNAQVKIL LEERPVEEPV TVPVVIQDEM LGGAQPPSLQ APEQDTPMMS
EAERDRMREE LLLLFERDGA PL
|
|---|
| |