| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1222 |
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| Symbol | spoU |
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| ID | 3515179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1464855 |
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| End bp | 1465415 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637669910 |
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| Product | tRNA/rRNA methyltransferase |
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| Protein accession | YP_264506 |
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| Protein GI | 71065779 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000000181503 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0200658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATTC ATATCGTGCT GGTAGCGCCA AAAATGCCCA GTAACACGGG CAATATCATT
CGTCTGTGTG CCAATAGTGG GGCGCAGCTG CATTTGGTCA AACCGTTAGG GTTTGAGCTG
GATGATAAAA AATTGCGCCG TGCAGGATTG GATTATCATG AGTATGCCCA TCTGCAAGTA
CACGATGATT GGTCGGTGGC AAAACAAGCA TTGCAAGATG CTGATTGTCA TACCATCACG
GCATTGACGA CCAAATTAAG CAAACCCTTT TATGATTATG ATTTTGGCGG GCAAGAGACT
GCAGAGTCGG GCAGTGAGTT TTCTGGAAAT AACGTAGCCA TGGTTTTTGG CTCAGAAACG
GCGGGATTGG CAGATGATAT TCGTGAAGAT ATTGGCGCTG ATAACTGGCT GCGACTACCG
ATGCTGGCAG ATTCGCGCAG TTTGAATCTC TCTAATAGCG TGGCAATATG CTTATATGAG
GTGTGGCGAC AACAAGGCTT TAGCGGTGAT GAAGGTCGCA GTATCGGCTA TGAGACACTG
ACTGTCTACG ACCCTAAATA G
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| Protein sequence | MTIHIVLVAP KMPSNTGNII RLCANSGAQL HLVKPLGFEL DDKKLRRAGL DYHEYAHLQV
HDDWSVAKQA LQDADCHTIT ALTTKLSKPF YDYDFGGQET AESGSEFSGN NVAMVFGSET
AGLADDIRED IGADNWLRLP MLADSRSLNL SNSVAICLYE VWRQQGFSGD EGRSIGYETL
TVYDPK
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