Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1207 |
Symbol | |
ID | 3514105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1450235 |
End bp | 1451002 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637669896 |
Product | glycosyl transferase family protein |
Protein accession | YP_264492 |
Protein GI | 71065765 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3306] Glycosyltransferase involved in LPS biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.539857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00960164 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAGAACC ATGTCATTAG CCTAACAACC GCGACTGATC GTCGTCAGCA TATAACTCAA GAATTTACAA AGCAAAACAT CTCTTTTGAG TTTTTTGATG CCTTAATACC AGACTTGGCT CATACTTATG CTCAAACTTT GCCCATTGAT TTAGAAAACA TCGCTTTGAC TGGTGGCGAA TTGGCATGTT TTATGAGCCA TGCTTCCGTT TGGCAACAAA TGATTGATCA AAACATACCT TATTTAGCTA TTTTTGAAGA CGATGTATAT TTAGGTGAAG ATGCAGAAGC GCTATTAACC ACCACGAGTT GGATAAAACC TGAATGGCAT ATTATTAAAA TAGAAGCCTT TTCTGAAAAA GTCTTTTTGT CTTCCAATTC CTCTAAAATT ATCTCAGATA GGCGGTGCAT TGCCCAATTA AAAGGGAGAA ATTTAGGTAC CGCAGGTTAT ATTTTGTCAT TGCGTGGTGC GCAAGTATAT TTGGACTATA TCTCAAAAAA CAAACTGCGA CCGCTTGATG AGTTAATGTT TGACGATTTT ATCAAACATG GCGCTGAACC CGTCTATCAA ATGACCCCTG CCCTATGTAT TCAAGAAATG CTTTTAAATA AAGGCAATCC CTCGCTCCCA AGTGCGCTAA TTAAAGATCG CCAAGGCCGT ATGAAGTCAG AGAAAAAACC TGCTATGTTT AAAGCGAAGC GCGAAATTAA CAGGATTGGG ATGAAGATTA AGAAAGCCAT ATTTGCAGCA GAAGTAGTTT TTAAATAG
|
Protein sequence | MQNHVISLTT ATDRRQHITQ EFTKQNISFE FFDALIPDLA HTYAQTLPID LENIALTGGE LACFMSHASV WQQMIDQNIP YLAIFEDDVY LGEDAEALLT TTSWIKPEWH IIKIEAFSEK VFLSSNSSKI ISDRRCIAQL KGRNLGTAGY ILSLRGAQVY LDYISKNKLR PLDELMFDDF IKHGAEPVYQ MTPALCIQEM LLNKGNPSLP SALIKDRQGR MKSEKKPAMF KAKREINRIG MKIKKAIFAA EVVFK
|
| |