Gene Psyc_1207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1207 
Symbol 
ID3514105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1450235 
End bp1451002 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content38% 
IMG OID637669896 
Productglycosyl transferase family protein 
Protein accessionYP_264492 
Protein GI71065765 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3306] Glycosyltransferase involved in LPS biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.539857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00960164 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGAACC ATGTCATTAG CCTAACAACC GCGACTGATC GTCGTCAGCA TATAACTCAA 
GAATTTACAA AGCAAAACAT CTCTTTTGAG TTTTTTGATG CCTTAATACC AGACTTGGCT
CATACTTATG CTCAAACTTT GCCCATTGAT TTAGAAAACA TCGCTTTGAC TGGTGGCGAA
TTGGCATGTT TTATGAGCCA TGCTTCCGTT TGGCAACAAA TGATTGATCA AAACATACCT
TATTTAGCTA TTTTTGAAGA CGATGTATAT TTAGGTGAAG ATGCAGAAGC GCTATTAACC
ACCACGAGTT GGATAAAACC TGAATGGCAT ATTATTAAAA TAGAAGCCTT TTCTGAAAAA
GTCTTTTTGT CTTCCAATTC CTCTAAAATT ATCTCAGATA GGCGGTGCAT TGCCCAATTA
AAAGGGAGAA ATTTAGGTAC CGCAGGTTAT ATTTTGTCAT TGCGTGGTGC GCAAGTATAT
TTGGACTATA TCTCAAAAAA CAAACTGCGA CCGCTTGATG AGTTAATGTT TGACGATTTT
ATCAAACATG GCGCTGAACC CGTCTATCAA ATGACCCCTG CCCTATGTAT TCAAGAAATG
CTTTTAAATA AAGGCAATCC CTCGCTCCCA AGTGCGCTAA TTAAAGATCG CCAAGGCCGT
ATGAAGTCAG AGAAAAAACC TGCTATGTTT AAAGCGAAGC GCGAAATTAA CAGGATTGGG
ATGAAGATTA AGAAAGCCAT ATTTGCAGCA GAAGTAGTTT TTAAATAG
 
Protein sequence
MQNHVISLTT ATDRRQHITQ EFTKQNISFE FFDALIPDLA HTYAQTLPID LENIALTGGE 
LACFMSHASV WQQMIDQNIP YLAIFEDDVY LGEDAEALLT TTSWIKPEWH IIKIEAFSEK
VFLSSNSSKI ISDRRCIAQL KGRNLGTAGY ILSLRGAQVY LDYISKNKLR PLDELMFDDF
IKHGAEPVYQ MTPALCIQEM LLNKGNPSLP SALIKDRQGR MKSEKKPAMF KAKREINRIG
MKIKKAIFAA EVVFK