| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1187 |
|---|
| Symbol | tal |
|---|
| ID | 3514085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 1424045 |
|---|
| End bp | 1424986 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637669876 |
|---|
| Product | transaldolase B |
|---|
| Protein accession | YP_264472 |
|---|
| Protein GI | 71065745 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0176] Transaldolase |
|---|
| TIGRFAM ID | [TIGR00874] transaldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.520683 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAT TACAACAGCT TCGCACTATG ACTACCATTG TCGCTGACAC AGGCGATCTT
GCCGCCATTG AGCGTCTAAA ACCTATCGAT GCGACCACCA ATCCAAGCCT AATTACCAAA
GCACTGATTC ATCCTGACAA TGAAGCGGTA TTATCAGAAA CCATGAGTCG CCATAGAAAT
GATATCGACG CCGTGATTGA CGAGCTGACC ATTCAAATCG GCTGCAATAT TCTATCTTTA
ATCGAGGGGC GCGTCTCAAC TGAGGTCGAT GCTCGTTTGT CCTATGACAC ACAAGCGACC
ATTGATAAGG CATTGGCGTT TATGGAAGCC TATCAAAAAT CCGGTATCGA CTCAGAGCGC
GTGTTGATTA AGATGGCAGC AACCTGGCAA GGTATTGAAG CTGCCCGCTA CCTCGAAACT
CAAGGCATTC ACTGCAATCT CACCTTGCTA TTTGGACAGC ATCAAGCCAT CGCTTGTGCC
GATGCTGGTG TGACCTTAAT TTCACCTTTT GTTGGACGTA TTTTGGATTG GCAAAAACGC
CAGCAAAACC GTCAAAACAT ACCAGTCTCT GATGACATGG GCGTACAATC GGTCAAGCTC
ATTTACCAAT ACTACAAGCA GCATGGCTAC AAAACGCAGG TGATGGGCGC AAGTTTTCGC
TCAACTGAGC AGATATTGGC GCTGGCAGGC TGTGATTTAT TAACCATTGC ACCCAACCTA
ATTGATGAGC TGGCAGCAAT GGATATCGAG GTTACACGTC AATTATCAGA AAGTATGTCG
ATGGACATGA CAGATATGAC GCGAGTTAGC TTGAGCGCTG AAGAATTCAG TCACGCCTAT
CAGCAGGATA CCATCACTCA AGATCTATTA CCCAAAGGCA TTGACGGCTT TATCAGTGCG
CGTGATGAGC TTGCCCATAT GCTAGCAAGT ATGCGCAGCT AA
|
|---|
| Protein sequence | MSALQQLRTM TTIVADTGDL AAIERLKPID ATTNPSLITK ALIHPDNEAV LSETMSRHRN
DIDAVIDELT IQIGCNILSL IEGRVSTEVD ARLSYDTQAT IDKALAFMEA YQKSGIDSER
VLIKMAATWQ GIEAARYLET QGIHCNLTLL FGQHQAIACA DAGVTLISPF VGRILDWQKR
QQNRQNIPVS DDMGVQSVKL IYQYYKQHGY KTQVMGASFR STEQILALAG CDLLTIAPNL
IDELAAMDIE VTRQLSESMS MDMTDMTRVS LSAEEFSHAY QQDTITQDLL PKGIDGFISA
RDELAHMLAS MRS
|
|---|
| |