| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1115 |
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| Symbol | |
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| ID | 3514813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 1327556 |
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| End bp | 1328797 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637669803 |
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| Product | methylitaconate delta2-delta3-isomerase |
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| Protein accession | YP_264400 |
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| Protein GI | 71065673 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.712247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAT CAACTTCAAC AAACAAACCA AGGTTTGCCC CACAAATCTC CGTCCCCGCC
ACCTATATGC GCGGAGGTAC GTCTAAAGGT ACCTTCTTTA AATTGTCCGA CTTACCTGAG
CGTTGCCAAG TCGCTGGCGA GTCGCGCGAT AACTTTCTAC TACGTGTTAT TGGTAGCCCT
GACCCTTATG GTAAGCAAAT CGATGGCTTA GGTAATGGTA GCTCTAGTAC CTCTAAGACG
GTGATTCTCT CTCCATCCGA TAAAGCAGAC CACGATGTCA ACTATCTGTT TGGACAGGTC
AATATCGCTA AGCCCATGAT TGATTGGGCA GGCAACTGCG GTAATTTAAC GGCGGCGGTC
GGCGCTTGTG CCATCAATAT GGGCTTGATA GATGCAGATA AAGTGTCTAA TAACGCGGAA
AGTGCTATCT GTGAGGTGCG TATTTGGCAA GAGAACATCA GTAAAACCAT TATCGCGTAT
GTACCTGTTT ATACTGATGA GCAAGGCAAG GTACAAGTGC AAGAAACGGG CGATTTTGAG
TTAGATGGTG TGACTTTCCC AGCGGCGGAA GTCAAAATCG AATTTATTGA TCCGGTAGAT
TCCTCTAGTG CTATGTTTCC CACTAATAAC CTAATTGATG ATTTCGATGT CTCTGGCTGT
GGTTTAAATA CTGATAGCGT TAAAGCAACC TTTATCAGCG CTGGTATCCC AACCATCTTT
ATGAAAGCAG AGGATTTGGG CTTTACCGGT ACTGAATTAC AATCTGATAT CAACAGCGAT
AGCGAACTGC TTGCCAAGCT TGAAAAAATC CGTGCCAAAG GCGGTGTCGC TATGGGATTG
TTCCAAGATA TCAGTGAGGC ACAAACCAGC CAACATATTC CAAAGATTGC TTGGGTTGCT
CCTGCGCAAA GTTACAGCGC TTCAAGTGGA AAAGCAGTTG ATGCAGCAGA TATTGATTTA
GTCGTACGCG CCATGAGTAT GGGACAATTG CATCATGCCA TGATGGGTAC AGCAGCAGTA
GCCATAGCAG CAGCAGCAAC TACTCAGGGA ACGTTAGTGA ATGAAGCGGC AGGTGCGGGC
GAGTTAGGTG AAGTGCGCTT TGGTCATCCA TCAGGTACTT TATTGGTTGG CGGAAAAACC
GAACGCGTGA ACGGTCGCTG GCAAGCCAAA AAAGTATCGA TGAGCCGCTC AGCACGTCGT
ATTATGGTTG GTGAAGTTTT TGTACCAGAA AATGCGTTTT AG
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| Protein sequence | MTQSTSTNKP RFAPQISVPA TYMRGGTSKG TFFKLSDLPE RCQVAGESRD NFLLRVIGSP
DPYGKQIDGL GNGSSSTSKT VILSPSDKAD HDVNYLFGQV NIAKPMIDWA GNCGNLTAAV
GACAINMGLI DADKVSNNAE SAICEVRIWQ ENISKTIIAY VPVYTDEQGK VQVQETGDFE
LDGVTFPAAE VKIEFIDPVD SSSAMFPTNN LIDDFDVSGC GLNTDSVKAT FISAGIPTIF
MKAEDLGFTG TELQSDINSD SELLAKLEKI RAKGGVAMGL FQDISEAQTS QHIPKIAWVA
PAQSYSASSG KAVDAADIDL VVRAMSMGQL HHAMMGTAAV AIAAAATTQG TLVNEAAGAG
ELGEVRFGHP SGTLLVGGKT ERVNGRWQAK KVSMSRSARR IMVGEVFVPE NAF
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