Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1094 |
Symbol | |
ID | 3514980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1305370 |
End bp | 1306284 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637669782 |
Product | LysR family transcriptional regulator |
Protein accession | YP_264379 |
Protein GI | 71065652 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.154385 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTACATA ATATGAATGG TATGAATGGT ATGAATGGTA TGAATCGGCT TGATATCAAG CAGCTTAGAG TATTGCACGC ACTGCTTGAT CTACAAAATC TCTCACAAGT CGCGCGCAAA ATGGGACTGA CACAACAAGC GATTAGTGAG CAGTTGCGTA AGCTACGGGA TTTGCTTGAT GATCGTTTGT TTATTCGTCA AGGCAATAGC ATGGTGGCAA CCCCAAAAGC ACTATCGATG CAGCAACCTA TCGGCGATAT ATTAAAACAG TTGGAAGTGT TGTTAGAGCC AGAGGTGTTT ACGCCGCAAA CATACAAAGG CGTCTTTACG ATTAGCGCAA CCGACTATGC GACGCAGGCA TTATTGCCGC AGTTGTTTAA TATAACGCGC CGTGAAGCGC CTGATTTAAG GCTGATAGTG AGAGATTTTG CCTCAGACAA TATCAATCAG CTTATTGCGG CAGGCGAACT TGATTTGCTG ATTACTTTTC CAGAGTTTAT CCCTGATAAC TTATCCTATG TGACACTATT TGAAGAACAA CATTTATGTG TGACAGGTTA TAAAAACACC TTTGCAACAG ATATCTTCAC ACTGGCGCAA GTTGCCGCAC ACCCGCAGCT GGTGGTATCA CCTTCGCGTG CCAATTTGCG CGGCTCGCAT GATCAATGGT TTGCAGAAAA AGGGCTCAAA CGCCATATTG TGATGTCAGT TCCTAGCTTC TCAGCAGTGC CAGATATCCT GCACACTACC GATATGATTG CCTTTTATCC TTCACGGTTA TTACCAAACA ATAAAGTTAA AGAGCTTAAA GTCGAAGCAT TACCGCCTAC CTTTAAGGTA ATCGCGGCAT GGCATCCACG TACCAGCGAC AGCGGTATAC ATCGCTGGTT AATTGAACAA TTACAAAACT TATAA
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Protein sequence | MVHNMNGMNG MNGMNRLDIK QLRVLHALLD LQNLSQVARK MGLTQQAISE QLRKLRDLLD DRLFIRQGNS MVATPKALSM QQPIGDILKQ LEVLLEPEVF TPQTYKGVFT ISATDYATQA LLPQLFNITR REAPDLRLIV RDFASDNINQ LIAAGELDLL ITFPEFIPDN LSYVTLFEEQ HLCVTGYKNT FATDIFTLAQ VAAHPQLVVS PSRANLRGSH DQWFAEKGLK RHIVMSVPSF SAVPDILHTT DMIAFYPSRL LPNNKVKELK VEALPPTFKV IAAWHPRTSD SGIHRWLIEQ LQNL
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